Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0569 ATGGTGAGGCCTCCATGCTGCGAGAAGCTCGGTGTTAATAAAAAGGGTGTTTGGACTCCAGAAGAAGATGCAAAGATGATAGCATTTGTCTCAAAGCATGGATCTGGTAATTGGACTTCTGTTCCCAAAAAAGCAGGTTTAAAGAGGTGTGGGAAAAGTTGCCGGCTCAGGTGGACTAATTACCTCAGACCAGATCTTAAGCATGATAGCTTCGCACCCCATGAAGAGGATTTAATTCTTAAGCTTCACGCAGCCATTGGAAGCAGGTGGTCTATGATTGCCCAACAACTTCCTGGGAGAACAGACAACGATGTAAAGAATTACTGGAACACAAAGCTGAAGAAGAAGCTCACTGGCATGGGAATAGACCCTGTCACTCACAAGCCCTTCTCTAAACTCCTAGCTGACTATGGAAACATTGGGGGTATCCAGAAACCAAGCACGCGAATTGGTTCTCTCAGTAAAGACTTTAAGAACACGGTATTGTTCAAACCAGACACATTTCCGAAGCTACCTTCATCTTCAACTTGTTCGCCAAAACTGGAACCACCAACAGAAAGTAGCTTTTTCAGTAACAGAGATGTGATGGAGAAGGAGACAATCCCAGCAGCTATATTTGGGGAAGGCTTCTTGTCATCGTCGTCATCTGCATCTTCTATTTGTTCCAATAGTAATGCTGCCCAAGAAGGCTTGTCTTTACCCTTTTGTTGGAATGATTTTCTCCTTGAAGATGATTTCCCACCTCCTCCAGCTGCTGCTGATAACAACCTAGACAATGAAAATCCAACAACAAACGAGAATAAGAATGAGGTGACGTCACAGCAAGTCCCCAGCAGTGACGTTCGGTATTCATCGTCGTTGTCATCCTCTGACATTTCATTCGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTCTTGAATTTCCCTCACCTAATGGAGGAACCCTCCACGTCCAACTACTGA 966 0.4431 MVRPPCCEKLGVNKKGVWTPEEDAKMIAFVSKHGSGNWTSVPKKAGLKRCGKSCRLRWTNYLRPDLKHDSFAPHEEDLILKLHAAIGSRWSMIAQQLPGRTDNDVKNYWNTKLKKKLTGMGIDPVTHKPFSKLLADYGNIGGIQKPSTRIGSLSKDFKNTVLFKPDTFPKLPSSSTCSPKLEPPTESSFFSNRDVMEKETIPAAIFGEGFLSSSSSASSICSNSNAAQEGLSLPFCWNDFLLEDDFPPPPAAADNNLDNENPTTNENKNEVTSQQVPSSDVRYSSSLSSSDISFVEAMLDQENEMFLNFPHLMEEPSTSNY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0569 321 MobiDBLite consensus disorder prediction 247 284 - -
Lele19g0569 321 MobiDBLite consensus disorder prediction 256 284 - -
Lele19g0569 321 PANTHER F14D16.11-RELATED 1 317 - -
Lele19g0569 321 CDD SANT 18 62 IPR001005 -
Lele19g0569 321 FunFam transcription factor MYB80 70 130 - -
Lele19g0569 321 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele19g0569 321 Pfam Myb-like DNA-binding domain 70 111 IPR001005 -
Lele19g0569 321 ProSiteProfiles Myb-like domain profile. 14 62 IPR001005 -
Lele19g0569 321 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele19g0569 321 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Lele19g0569 321 CDD SANT 73 113 IPR001005 -
Lele19g0569 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Lele19g0569 321 SMART sant 67 115 IPR001005 -
Lele19g0569 321 SMART sant 14 64 IPR001005 -
Lele19g0569 321 FunFam MYB-related transcription factor 14 67 - -
Lele19g0569 321 Gene3D - 69 129 - -
Lele19g0569 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Lele19g0569 321 Gene3D - 15 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0569 Lele-ChrLele19 3262678 3264449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0569 1 315 MYB Transcription Factor Family AT3G28470 44.512 2.82e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele19g0569 Myb_DNA-binding 5e-15 CL0123