Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0564 ATGGTGTCCACGTCTCAGAAGAAAAGCCTCCACTCCATCCTTGCTGCAAACCTTGGCAAGCTCACCATACCTTCTTCTTCTTCCTCCACCACTCACCATGATTTCGACTTTCCTCCTTTCTCTTCCCACGATCCCAATCCATCTCCATCCACTGCCATCCCTGGTAGCCCACAGATTATTCAGAGTAGGTCCCACTCCTTTGTAGGACCCTCCCCTCGATTCGCCCAATCCTCCAATTCCCTGGCGTTCGTTAATGAGCTCGATTCCCAGAGCGATGACGAGACTGAAATTGTTGTCGGAAGTGGGTTAGGAATCGATTCTGAAGTTGGCGAAAAGCAAAAAGTGGGTGTGAGTGATTCTGGAGAGAAATTGGTATGCAAAATTGGACCTGGGGATTTTCAAATCTTGAGAGTTGTCGGGCAGGGCGCGTTCGGGAAAGTCTTTCAGGTAAGGAAATATAGTGACCCTTTGGATGGAGAGGGTGGTGGCGGCGGCGGCCATGGTGATGGCATTTTTGCAATGAAGGTGATGCGGAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCCGAGAGAGATATTCTCACTAAAGTAGTTCATCCTTTTATTGTTCAGCTCCGCTACTCTTTTCAGACCAAATCTAAATTATACTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATCGCCAGGGTATCTTCAGTGAGGATCAAGCAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCTCATCTTCACAAGTGTGGAATCGTGCATCGAGATCTTAAACCAGAAAATATACTTATGGATGCTGACGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGGAGATCTAACTCTTTATGTGGGACCACAGAATATATGGCTCCAGAAATCTTACTGGCTAAAGGCCACAACAAGGAGGCAGATTGGTGGAGCGTCGGCATACTGTTGTATGAAATGCTAACGGGGAAGCCCCCATTTACACACGCTAACAGAAAGAAACTACAAGAGAAAATTGTTAAAGAGAAAGTGAAACTTCCACCATTGCTTACCGCTGAAGCCCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAAAAGGTTGGGCAATGGACCAAATGGAGACATCCAGATTAAAAGTATCAAGTGGTTTCACTCAATCAATTGGAAGAAACTGGAGGCAAGAGAACTGCAGCCAAAATTCAAACCAGATGTGAATGGCTTAGACTGTACGGCTAATTTTGATCAATGCTGGACCTCAATGTCTCCTGTTGATTCACCAGCACCCACACCTACAGCATCTGACCATTTCCAGGGCTATTCTTACGTGGCACCGAACCCTTGGCTTTCATCAAACTTCACTGAATGA 1422 0.4487 MVSTSQKKSLHSILAANLGKLTIPSSSSSTTHHDFDFPPFSSHDPNPSPSTAIPGSPQIIQSRSHSFVGPSPRFAQSSNSLAFVNELDSQSDDETEIVVGSGLGIDSEVGEKQKVGVSDSGEKLVCKIGPGDFQILRVVGQGAFGKVFQVRKYSDPLDGEGGGGGGHGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTTEYMAPEILLAKGHNKEADWWSVGILLYEMLTGKPPFTHANRKKLQEKIVKEKVKLPPLLTAEAHSLLKGLLQKDPSKRLGNGPNGDIQIKSIKWFHSINWKKLEARELQPKFKPDVNGLDCTANFDQCWTSMSPVDSPAPTPTASDHFQGYSYVAPNPWLSSNFTE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0564 473 ProSiteProfiles AGC-kinase C-terminal domain profile. 403 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele19g0564 473 Gene3D Phosphorylase Kinase; domain 1 132 446 - -
Lele19g0564 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Lele19g0564 473 Pfam Protein kinase domain 133 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0564 473 Gene3D Transferase(Phosphotransferase) domain 1 226 421 - -
Lele19g0564 473 FunFam Non-specific serine/threonine protein kinase 226 421 - -
Lele19g0564 473 Pfam Protein kinase C terminal domain 423 460 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele19g0564 473 ProSiteProfiles Protein kinase domain profile. 133 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0564 473 PANTHER RIBOSOMAL PROTEIN S6 KINASE 79 464 - -
Lele19g0564 473 MobiDBLite consensus disorder prediction 46 71 - -
Lele19g0564 473 MobiDBLite consensus disorder prediction 23 71 - -
Lele19g0564 473 SMART serkin_6 133 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0564 473 SMART pkinase_C_6 403 462 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele19g0564 473 SUPERFAMILY Protein kinase-like (PK-like) 131 466 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0564 Lele-ChrLele19 3240309 3243067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0564 57 463 AGC Kinase Gene Family AT3G08720 60.244 1.01e-176 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele19g0564 Pkinase 4.7e-69 CL0016