Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0514 ATGGGTTTTTCATCTCTGCATGTTTGCATGGAATCATCAGATCACTGGCTCCAGGGCACAATTTACGAGGAATCTGGATTGGATTCGTCTTCAGCATCAGCAGGAGACCTGCTTTCATGCTCCAGGCCGTTGATAGAGAGGAGGCTAAGACCTCCACATGATCAAGCCCTGATCAAGTGCCCTAGGTGTGACTCCACACACACCAAGTTCTGCTACTACAACAATTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGTGGTACCCTCAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCTAACAAGAAATCCAATAATAATAATGACACACCACATAATAATATTCAAAACCAACCATTATCATCACAGCCTGCTGTAGGAATAGCCACCTCTTATCACCTCAACCCTAAAGACCATCATCTTCAACTTTCTTTCCCAGATGCTCAGTTTTCTCACATCGATAACTTACTGGGAAATCCTAATTTCATGCTTGAGAACCCTAGGCCTATTGACTTCATGGAGAGTAAGTTGGGAGGGATAATTGGGAGTGCTTCTTCTAGGAACTTCCATTTTCTGGGAAATGGTGACAATATGGGTATGGGAATTGGGGTTGGAGACATTAATGGTCATCATCATCACAATGGGTTGCCGCCAAATTTTCAGAGTCTTTGCTCTCCATCGGCATTTGTTGGGGGTATGCCATCTTTTGATGGTAATAACAGTAATAATATCATGGACTCTTCTTGCCAGAGACTGATGCTGCCATGTGATCATGCCAATGAGGACCCAAATGCCACCATTGATGTGAAGCCCAACCCTAAGCTTCTGTCTCTTGAATGGCAGGACCAGGGTTGCTCGGATGCTGGAAAAGAGACGTCGTTTGGGTATTTTAACGGTCTAGGATCATCATGGACAGGCATGATCAACGGCTATGGTTCATCCACGACAAATCCTCTGGTCTAA 1005 0.4498 MGFSSLHVCMESSDHWLQGTIYEESGLDSSSASAGDLLSCSRPLIERRLRPPHDQALIKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNKKSNNNNDTPHNNIQNQPLSSQPAVGIATSYHLNPKDHHLQLSFPDAQFSHIDNLLGNPNFMLENPRPIDFMESKLGGIIGSASSRNFHFLGNGDNMGMGIGVGDINGHHHHNGLPPNFQSLCSPSAFVGGMPSFDGNNSNNIMDSSCQRLMLPCDHANEDPNATIDVKPNPKLLSLEWQDQGCSDAGKETSFGYFNGLGSSWTGMINGYGSSTTNPLV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0514 334 Pfam Dof domain, zinc finger 57 112 IPR003851 GO:0003677|GO:0006355
Lele19g0514 334 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Lele19g0514 334 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 207 IPR045174 GO:0003700|GO:0006355
Lele19g0514 334 MobiDBLite consensus disorder prediction 107 135 - -
Lele19g0514 334 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Lele19g0514 334 MobiDBLite consensus disorder prediction 117 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0514 Lele-ChrLele19 2949885 2951246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0514 1 334 C2C2-Dof Transcription Factor Family AT5G62940 42.643 6.61e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele19g0514 zf-Dof 3.6e-33 No_clan