Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0499 ATGAAGAAGCATATGTTGGTCAGAGATTCTACAATGTGTAGTCTTTGGATATGCCATTTCTTTCTTCTGTTTCTGACCATACTAAATGCTTCTTTCGTCGCCAAAGTTCTTGGAGACAATGACTCAGATTCCTACTGGCTTCTTAAAATGAAATCGCAACTGGCTGACCCATTAGGAGCTCTCAAAGATTGGTCTCCCATGGTTCCTATGTGTACCTGGCATGGAGTAACATGTTCACTTGATCAGTCCCATGTTGTTGGCCTGAACTTGTCTGGTTCTGGAATTTCTGGTTCCATGTCAGTTGAGCTCAGCCACCTCACCTCTCTTCAAATACTTGATTTGTCTTCAAATTTCCTCACTGGTTCTATTCCTTCTGAGATTGGGATGCTACAGAACCTAAGAATACTTCGACTGTTCTCAAATTATTTTTCTGGCACCATTCCTGAAGAGATAGGAAATTTGAAGAAGTTGGAGGTTCTTAGAATAGGAGACAACTTGTTGACAGGTGAAATCACACCAAGTATAGGTAACTTGGAAGAGTTGAAAGAATTGGGTTTAGCTTTCTGCTATTTTAATGGAAGCATACCCACTGAGATTGGAAGCTTGCAGAATCTAGTTTCTCTTGATTTGCAGATGAACAGTTTATGGGGCCACATACCCAAAGAAATTCAAAGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACGTACCTTCTTCTTTGGGGTCTCTTGTATCATTGCAAATTCTGAACCTAGCGAATAATAGTCTCTCTGGGTCAATTCCCTCTACCTTGAGCCTTCTCTCCAAGTTGAAATATCTGAATTTGCTTGGAAACACACTAAGTGGGGAAGTTCCTTCAGAACTCAACAGTTTGGCTCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCGATAAACCTGGTTAATTCCGAACTAAAGAGTCTCCAAACTCTGGTTCTGTCTGATAATTTTTTGACAGGTAATATCCCAGCCAAGTTCTGCTTCAGTGGGTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATGAACTTTCTGGTAAGTTCCCCTTGGAGTTACTCAGTTGCTCCTCACTTCAACAATTGGACCTTTCTGATAACAGCTTTGAAGGGGAACTTCCGACAACCTTGGACAAACTGCAGAACCTCACAGATCTTGCTCTCAACAACAACAGCTTCGCAGGATCTCTACCTCCAGAAATTGGAAACATTAGTACCTTGGAGGGCCTGTTCTTGTTTCACAACATGTTTACAGAAAAAATCCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAATAATATACCTTTATGATAACCAGATGTCTGGTCCAATACCAAGAGAGTTAACAAACTGCACAAGCTTAAGGGAAATTGACTTCTTTGGGAACTATTTTTCTGGGCCCATTCCAGAGACCATAGGTAAGCTCAAGGACTTGGTTCTGCTTCATCTGAGGCAGAATAACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAGACGTCTTCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCCATACCACCAACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTTGAAGGATCACTTCCAGGGTCACTCTTTCTTCTTAAAAACCTCAAGATCATAAATTTTTCTCATAACAGGTTCAGTGGAACTATCCTTCCTCTCACTGGTTCACATTCTCTGAATGCTTTGGACTTGACTAACAATAGCTTCTCAGGTCCCATCCCTTCAAGCTTAGCCATGTCAAGGAATCTCAGCCGTCTAAGACTTGCACAAAACCAACTCACAGGAAGCATTCCATCTGAATTTGGTCAGCTCAATGAACTCAACTTCCTTGATTTGTCTTTTAACAATTTGACAGGAGAGGTGGCACCTCAACTGTCAAACTGTAAAAAGATCCAACACTTTCTACTCAGTAATAACAGATTGGGAGGGAAAATGCCTTCTTGGTTGGGAAGTTTGCAAGAACTTGGTGAGCTTGATCTCTCATTCAATGACTTCAATGGAAGCTTACCTTCTGAGCTTGGAAACTGTTCAAAATTGCTGAAGCTTTCTCTGCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTTACTTCCCTCGATGTCCTTAACTTGCAAAGCAATCATTTCTCAGGCTTCATTCCTTCATCCATTCAGCAATGCAAGAAGCTTTATGAGCTCAGGCTCTCAGACAACCTCTTTAGAGGTGATATACCAGATGAGCTTGGAGAACTTACAGAACTCCAAGTGATATTGGACTTGAGCAAAAATCTCTTATCTGGGAAAATCCCATCATCGCTGGGAAACCTCATGAAGCTAGAAAGAATCAATCTTTCTTTTAATAATCTTCATGGACAAGTTCCTCCTTCTCTTGGAAAACTAACAAGCTTGCACGTGTTGAATATCTCGTACAACCATCTCCAAGGCCAGATTCCTTCAACATTCTCAGAGTTCCCACTAAGCTCCTTCATGAACAATGACCACATGTGTGGCCCACCATTGTTATCGTGCCCAGGATCAAAAGGGCAAGATCAAGTGGTGCTGTCTAACAAGGCAGTGACTGCAATCATAGTGGCCATTGTCTTTACTTCTACTTTGATATGCTTAGTGTTGTTGTATATTATGGTGAGAATTTGGTGTAACTGGAGGGAAGTTGCGATTTCAAGTGCAGAAGGAGGCATGGGAGAGCGAAAGAAAGAGGAAGCTAGATGGATCTATAATAGTGACAAGAAAACCAGAAATGGAGAGTATTGGAAGATGAACACTTTTGGGTTTAGTCCTTCACCGGATAAGCAGAGTCCAGAATCAACGGCTTGTGTTTTCAATCTTAAAATGAAAGCAGAAGCAATGGAAAATTCCTTGGTTTGA 2967 0.4122 MKKHMLVRDSTMCSLWICHFFLLFLTILNASFVAKVLGDNDSDSYWLLKMKSQLADPLGALKDWSPMVPMCTWHGVTCSLDQSHVVGLNLSGSGISGSMSVELSHLTSLQILDLSSNFLTGSIPSEIGMLQNLRILRLFSNYFSGTIPEEIGNLKKLEVLRIGDNLLTGEITPSIGNLEELKELGLAFCYFNGSIPTEIGSLQNLVSLDLQMNSLWGHIPKEIQSCEKLQNFAASNNLLEGDVPSSLGSLVSLQILNLANNSLSGSIPSTLSLLSKLKYLNLLGNTLSGEVPSELNSLAQLQKLDLSKNNLSGPINLVNSELKSLQTLVLSDNFLTGNIPAKFCFSGSKLEQLFLARNELSGKFPLELLSCSSLQQLDLSDNSFEGELPTTLDKLQNLTDLALNNNSFAGSLPPEIGNISTLEGLFLFHNMFTEKIPVEFGRLQRLKIIYLYDNQMSGPIPRELTNCTSLREIDFFGNYFSGPIPETIGKLKDLVLLHLRQNNLWGPIPPSMGYCRRLQLLALADNKLSGSIPPTFSYLSELRTITLYNNSFEGSLPGSLFLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGPIPSSLAMSRNLSRLRLAQNQLTGSIPSEFGQLNELNFLDLSFNNLTGEVAPQLSNCKKIQHFLLSNNRLGGKMPSWLGSLQELGELDLSFNDFNGSLPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLDVLNLQSNHFSGFIPSSIQQCKKLYELRLSDNLFRGDIPDELGELTELQVILDLSKNLLSGKIPSSLGNLMKLERINLSFNNLHGQVPPSLGKLTSLHVLNISYNHLQGQIPSTFSEFPLSSFMNNDHMCGPPLLSCPGSKGQDQVVLSNKAVTAIIVAIVFTSTLICLVLLYIMVRIWCNWREVAISSAEGGMGERKKEEARWIYNSDKKTRNGEYWKMNTFGFSPSPDKQSPESTACVFNLKMKAEAMENSLV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 389 485 IPR032675 -
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 292 388 IPR032675 -
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 40 193 IPR032675 -
Lele19g0499 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 581 - -
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 486 581 IPR032675 -
Lele19g0499 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 198 291 - -
Lele19g0499 988 Pfam Leucine rich repeat 324 383 IPR001611 GO:0005515
Lele19g0499 988 SUPERFAMILY L domain-like 346 670 - -
Lele19g0499 988 Pfam Leucine Rich Repeat 108 127 IPR001611 GO:0005515
Lele19g0499 988 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Lele19g0499 988 SUPERFAMILY L domain-like 42 315 - -
Lele19g0499 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 874 - -
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 582 879 IPR032675 -
Lele19g0499 988 Gene3D Ribonuclease Inhibitor 194 291 IPR032675 -
Lele19g0499 988 PANTHER POLYGALACTURONASE INHIBITOR 1 532 651 - -
Lele19g0499 988 SMART LRR_typ_2 778 803 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 322 347 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 106 130 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 250 274 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 827 850 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 682 706 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 491 515 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 730 753 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 395 419 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 154 178 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 202 226 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 634 658 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 298 320 IPR003591 -
Lele19g0499 988 SMART LRR_typ_2 539 563 IPR003591 -
Lele19g0499 988 FunFam Uncharacterized protein 389 484 - -
Lele19g0499 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 40 197 - -
Lele19g0499 988 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Lele19g0499 988 SMART LRR_sd22_2 106 127 - -
Lele19g0499 988 SMART LRR_sd22_2 443 475 - -
Lele19g0499 988 SMART LRR_sd22_2 298 319 - -
Lele19g0499 988 SMART LRR_sd22_2 202 234 - -
Lele19g0499 988 SMART LRR_sd22_2 154 180 - -
Lele19g0499 988 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Lele19g0499 988 SUPERFAMILY L domain-like 588 863 - -
Lele19g0499 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0499 Lele-ChrLele19 2857250 2860216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0499 239 870 Receptor kinase-like Gene Family AT5G46330 33.474 2.59e-100 339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele19g0499 19 2857250 2860216 Lele21g1781 21 25490478 25493579 CCT
Lele19g0499 19 2857250 2860216 Lele22g1757 22 22830211 22833329 CCT
Lele19g0499 19 2857250 2860216 Lele23g0226 23 1550192 1557436 CCT
Lele17g1060 17 21145261 21148227 Lele19g0499 19 2857250 2860216 hybridization
Lele18g0479 18 2816016 2818970 Lele19g0499 19 2857250 2860216 hybridization