Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0492 ATGCCTGTGAACCCATGGAAACTCTTCTTCCTCTGCTTTTCTCTCTCACTTCTTCATCATTCTTTTATAGCTTTTGCGGTGAACTCGCAAGGAGAAGCTCTTATTTCATGGAAGAGAACCCTCAAGGGATCCCTGGAGGTGTTGAGCAATTGGAATCCAAATGACAGTACACCATGTGGCTGGTTTGGAGTTAACTGTAACTCCAAAAACGAGGTTGTGAAATTAGATCTGAGGTACGTGGATTTGGTTGGGACGCTTCCTTCTAATTTCACCTCCTTGCTTTCCCTGAACGAGCTAGTCCTAATGGGAACGAACCTCACTGGTTCAATTCCGAAAGAAATAGGCACTCTTGGCGAGCTCGATTACTTGGACTTGAGCGACAATGCATTGACAGGTGAAATCCCTAGTGAACTTTTCTTCTTGACAAAGCTTAAGCAACTCCATCTGAACTCAAACCAGCTCGTGGGTTCGATTCCGAATGCAATTGGGAACCTCACAGAGTTGAAGTGGCTGGTTTTATATGACAATCAACTACGTGGCGAAGTTCCCAGAACCATTGGTTACTTGAGGAACCTGCAAGTGATCAGAGCTGGAGGAAACAAGAACCTTCAGGGCTACTTGCCACACGAAATTGGCAACTGCACCGATTTGGTCATCTTGGGTTTGGCTGAAACTAGTCTCTCAGGTTTTCTTCCTCCAACTCTTGGCCTTCTTAAGAAGCTTGATACTCTTGCGATTTACACTTCACTTATCTCTGGTCAAATTCCTCCCGAACTCGGTGATTGCGATGAGCTTCAGAACATTTATCTGTACGAGAATTCTCTCTCAGGATCGATACCAACTAGACTAGGAAATCTTAGAAACCTAAAAAATCTTCTACTATGGCAGAACAATCTAGTTGGCACCATCCCACCAGAGATAGGAAATTGCTACCAGTTATCCGTCATTGACATTTCGATGAACTCACTTGTCGGAAGTATTCCCAAAAGTTTTGGAAATTTGACGTTGCTCGAGGAACTTCAACTCAGCGTCAATCAGATTTCGGGTCAGATTCCAACGGAATTGGGAAACTGTCAGCTACTTACTCACATTGAACTGGACAACAATCTAATCACGGATACGATACCTTCTGAGTTTGGGAACCTTAGGAATCTAACTCTGTTGTTCTTGTGGCATAACAAGCTCGAAGGAACTATACCATCTTTGCTTTCGAGTTGTCAAAATCTGGAAGCAGTGGATCTGTCACAGAATGGATTGACTGGTTCCATACCCAAGGGGATATTCCAGCTCAAGAATCTGAACAAGCTTTTACTACTCTCTAACAATCTCTCCGGGAATATACCCCCAGATATTGGGAACTGTTCATCTCTGATTCGGTTTCGAGCCAGCAACAATAAAATCACTGGCAGCATTCCACCAAATATCGGAAATCTGAAGAACTTGAATTTCTTGGACCTTGCAAGCAATCGCATTTCTGGAGTTATTCCAGAAGAGCTCTCAGGCAGTCGGAATCTCGCATTCCTGGATCTCCATTCCAACTTGATATCTGGAAGCTTGCCGGAAAGTCTCAGCCAGCTAGGCTCGCTCCAATTTTTTGATGTCTCCGATAACATGGTTGAAGGTAAACTAAGCCCAAGCCTTGGAAAGCTTGGCGAACTCACCAAACTCATTCTCAGAAAAAATCATATCTCCGGGTCAATTCCTAGTGAATTTGGTTCTTGTTCGAAGCTGCAATTACTGGACCTCGGTAGCAATGAGCTCTCAGGCAAAATCCCAGGTAGTCTAGGTAACATTCCGGCGCTCGAAATCGCAATGAACCTCAGCTGGAATCAGCTCTATGGCGAGATCCCCAGGGAGTTTTCTGCATTGAGCAAACTTGGAATTTTGGACATTTCGCACAACGAACTCAACGGTAGCCTTCAGTATCTCGAGGACCTCCAAAATCTCGTAGTCCTCAACATCTCATACAACAATCTCTCGGGTCGCGTGCCAGACAAGCCTTTCTTCTCAAAGCTTCCCCTCAGCGCCCTCGAGGGGAACCCATCGCTCTGCTTCCCCGGCAACCGATGCCCCGGACCCGGAGACACTTCCAGACGATCCATTCGGCGGACAAACGCCGCTCGTGTGGCCATGGTGGTCCTTCTGTGCACCGCTTGTTTGCTTTTCCTCACAGCCTTGTACGTCATCGTTGCCGCAAAAAGGCGCGAGGACGGCCTGGACATCGACGGTGGGGATAGGGACGCGGAGATGAGCCCACCTTGGGAGGTGACACTCTATCAGAAGCTAGACTTGTCAATCTATGACGTGGCGAGATGCCTGACAGTTGGCAACATAATCGGTTGTGGACGATCCGGCGTTGTTTATAGAGTAGATCTCCCGTCGGGATTAACAATCGCCGTGAAAAGTTACAGATTGTCGGAGAAATTCGCAGCCTCTGCATTCTCCTCAGAGATCGCCACGCTAGCAAGAATCCGGCACCGGAATATTGTACGGCTATTGGGTTGGGCGGCAAACCGAAAAACGAAATTACTGTTGTATGATTATTTACCCAACGGTAATTTAGATACGCTCTTGCATGGGGGCTGCACGGGATTAGTCGAATGGGAGACACGGTTGAAGATAGCATTGGGCGTAGCCGAAGGCTTAGCTTATCTACACCATGACTGCGTGCAGGCCATCTTGCACCGGGACGTCAAGGCGCATAACATTTTGTTGGGAGACACATACGAACCATGTTTGGCAGATTTTGGATTTGCAAGATTGGTAGACTACGATCACAGTCCGTTTTCCGCTAATCCACAGTTCGCGGGCTCTTACGGCTACATTGCGCCGGAATATGGATGCATGGTAAGGATCAGAGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTACTGTTGGAGATAATAACGGGTAAAAGACCCGTGGACCCATCATTGGCGGAGGAGGAGGGAGAGCACGTGATAGGGTGGGTGAGACAGAAGCTGAAGAGCAAGAAGGACCCATTGGAGATTGTGGATTCTAAGTTGAGAGGCCTTCCAGACACTGAAATCCAAGAGATGCTTCAGGCCGTTGGGATTGCTCTCTTGTGCACGAGTCAGCGTCCAGACGATCGCCCCACCATGAAGGATGTTGCCGCATTATTGACAGAGATTCATCACGATCCTTCCCTCTCTGATCAGCCCCACAAGCCACCCACCTCCCTTTCCCCGAAAACGACGCCTCATCCTTCCTCGTTTTCCTCCTCCTCCGCCTTGTCGCGCCTCCCGTCCTTTTCTCATTCATCCACCCTCCCCCCCGCTTATTCTTCTTCTTCTTTCTCCTCTTGCCGTTTAGCCCCCACCTGA 3345 0.4807 MPVNPWKLFFLCFSLSLLHHSFIAFAVNSQGEALISWKRTLKGSLEVLSNWNPNDSTPCGWFGVNCNSKNEVVKLDLRYVDLVGTLPSNFTSLLSLNELVLMGTNLTGSIPKEIGTLGELDYLDLSDNALTGEIPSELFFLTKLKQLHLNSNQLVGSIPNAIGNLTELKWLVLYDNQLRGEVPRTIGYLRNLQVIRAGGNKNLQGYLPHEIGNCTDLVILGLAETSLSGFLPPTLGLLKKLDTLAIYTSLISGQIPPELGDCDELQNIYLYENSLSGSIPTRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLVGSIPKSFGNLTLLEELQLSVNQISGQIPTELGNCQLLTHIELDNNLITDTIPSEFGNLRNLTLLFLWHNKLEGTIPSLLSSCQNLEAVDLSQNGLTGSIPKGIFQLKNLNKLLLLSNNLSGNIPPDIGNCSSLIRFRASNNKITGSIPPNIGNLKNLNFLDLASNRISGVIPEELSGSRNLAFLDLHSNLISGSLPESLSQLGSLQFFDVSDNMVEGKLSPSLGKLGELTKLILRKNHISGSIPSEFGSCSKLQLLDLGSNELSGKIPGSLGNIPALEIAMNLSWNQLYGEIPREFSALSKLGILDISHNELNGSLQYLEDLQNLVVLNISYNNLSGRVPDKPFFSKLPLSALEGNPSLCFPGNRCPGPGDTSRRSIRRTNAARVAMVVLLCTACLLFLTALYVIVAAKRREDGLDIDGGDRDAEMSPPWEVTLYQKLDLSIYDVARCLTVGNIIGCGRSGVVYRVDLPSGLTIAVKSYRLSEKFAASAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDTLLHGGCTGLVEWETRLKIALGVAEGLAYLHHDCVQAILHRDVKAHNILLGDTYEPCLADFGFARLVDYDHSPFSANPQFAGSYGYIAPEYGCMVRIREKSDVYSFGVVLLEIITGKRPVDPSLAEEEGEHVIGWVRQKLKSKKDPLEIVDSKLRGLPDTEIQEMLQAVGIALLCTSQRPDDRPTMKDVAALLTEIHHDPSLSDQPHKPPTSLSPKTTPHPSSFSSSSALSRLPSFSHSSTLPPAYSSSSFSSCRLAPT 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0492 1114 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Lele19g0492 1114 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Lele19g0492 1114 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lele19g0492 1114 Gene3D Ribonuclease Inhibitor 604 691 IPR032675 -
Lele19g0492 1114 Gene3D Ribonuclease Inhibitor 363 603 IPR032675 -
Lele19g0492 1114 SMART serkin_6 773 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0492 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 604 689 - -
Lele19g0492 1114 ProSiteProfiles Protein kinase domain profile. 773 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0492 1114 Pfam Protein kinase domain 775 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0492 1114 SMART LRR_sd22_2 478 501 - -
Lele19g0492 1114 SMART LRR_sd22_2 382 411 - -
Lele19g0492 1114 SMART LRR_sd22_2 623 648 - -
Lele19g0492 1114 SMART LRR_sd22_2 141 167 - -
Lele19g0492 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Lele19g0492 1114 Gene3D Transferase(Phosphotransferase) domain 1 849 1063 - -
Lele19g0492 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Lele19g0492 1114 Gene3D Ribonuclease Inhibitor 283 362 IPR032675 -
Lele19g0492 1114 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 432 1048 - -
Lele19g0492 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Lele19g0492 1114 MobiDBLite consensus disorder prediction 1060 1114 - -
Lele19g0492 1114 Gene3D Phosphorylase Kinase; domain 1 765 848 - -
Lele19g0492 1114 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Lele19g0492 1114 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515
Lele19g0492 1114 Pfam Leucine rich repeat 480 537 IPR001611 GO:0005515
Lele19g0492 1114 SMART LRR_typ_2 117 141 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 165 189 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 382 406 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 646 679 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 478 501 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 286 310 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 430 454 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 550 574 IPR003591 -
Lele19g0492 1114 SMART LRR_typ_2 334 358 IPR003591 -
Lele19g0492 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
Lele19g0492 1114 SUPERFAMILY L domain-like 69 420 - -
Lele19g0492 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase At4g26540 family 520 603 - -
Lele19g0492 1114 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Lele19g0492 1114 MobiDBLite consensus disorder prediction 1053 1114 - -
Lele19g0492 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 849 1064 - -
Lele19g0492 1114 SUPERFAMILY L domain-like 379 686 - -
Lele19g0492 1114 SUPERFAMILY Protein kinase-like (PK-like) 765 1084 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0492 Lele-ChrLele19 2796352 2800246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0492 25 1059 Receptor kinase-like Gene Family AT5G56040 55.014 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele19g0492 Pkinase 3.3e-38 CL0016