Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0488 ATGCCAGGTTGCATCTTCGCGCCTTACTTCCCACCCGAGGAGCCTCAAAAATTCGCCCACGTGCACAAAATCTTCGGTGCCAGCAACGTCACCAAGCTCCTCAACGAGCTCCTTCCTCACCAGAGAGAAGACGCCGTCAACTCTCTCGCCTACGAAGCAGAGGCTCGCGTGAGAGACCCAGTTTATGGCTGCGTCGGAGCCATCTCCTTCCTTCAGAGACAGGTTCAGAGGCTTCAGAAGGAGCTCGAAGCTGCGAATGCCGATCTTCTCCGTTTTGCCTGCAACGAGATCCCTCCGGCTAATTCTCTCTCCATGGTGCTACCTGGTTTAGGAATCACACCTTCATCGTTTCAAGTTCAACAACCTCCTCAGAGGCCAAGGTCGACGACTATGGAGTATATCAATGGAAGAATCAGCAGTACTGAAGGAGGAGGGGGTGGGTTGTACAGGCAATTTCCTGCAGCTTATAATTATTCTCTTCCTTATACTATTCCATGGGCTGATACAGCTTCTGATCATGGCATCGATGAGGGAGCTGCAGCAGGTGGTGGTGGAGGTAATTTGTAA 567 0.5168 MPGCIFAPYFPPEEPQKFAHVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELEAANADLLRFACNEIPPANSLSMVLPGLGITPSSFQVQQPPQRPRSTTMEYINGRISSTEGGGGGLYRQFPAAYNYSLPYTIPWADTASDHGIDEGAAAGGGGGNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0488 188 Pfam Lateral organ boundaries (LOB) domain 2 86 IPR004883 -
Lele19g0488 188 ProSiteProfiles LOB domain profile. 1 89 IPR004883 -
Lele19g0488 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 118 - -
Lele19g0488 188 Coils Coil 68 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0488 Lele-ChrLele19 2768940 2769506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0488 1 92 AS2 family AT5G63090 91.304 7.13e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele19g0488 LOB 4.5e-32 No_clan