Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0434 ATGTATCCTCCTCTTTATAGAGTCGCAGTCAAGGATGAGATTGGTGGCGGTGATGATGAAAATTCAGTATTTGGCCTCAGTCTTCAACTCGCAGCAATGGGTTGCTATACTTATCCTCGTATTCCCACTTCTGCAGCTTCCACTAATTGGATCCTTCCTCGTTCTGTTGATGATGAAACCAAGAGGGACCTAAAAATGATTAAGAGAACCATAAGCATGTCCGATTTACTTGAAGATTTCACCAGTAATCATTCGAGCAGTGGAAATAATGGCGATACACGTGGCAGCAGCAATATGAATAGCTTGCCAAGGCTTCATTTCAGAGATCACATATGGACTTATACTCAGAGATACCTTGCAGCTGAAGCTGTCGAAGAAGCAGCAAAAGAGATGATCGATTCTGAAACTCATCATGAAGATGAAGCTGAGAAAGATGGATGTGCTGACGGAATGAGACTTGTTCAACTTCTAATTGCTTGCGCAGAAGCTGTAGCTTGTCGTGACAAATCACATGCTTCTAATTTACTATCTCAACTTAGATCCAATGCTTTGGTTTTCGGTTCTTCTTTCCAAAGAGTTGCGTCTTGTTTCGTCCAAGGCCTAGCTGATCGTCTTGCTTTGATTCAACCTATTAGAGCTGTGGGATCTGTAACACCTATAATGAACATTATGGATAAAGCTTCTGCAAAAATGGAAGAAGCTTATAAATTAATGTACGAGATTTGTCCACATATTCAGTTTGGTCACTTTGTAGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTTTTCTTCACGTGGTTGACTTGGGGATGAGCCTTGGTCTCCCACATGGGCACCAATGGCGAGCACTGATCCAGGATCTTGCTAGCCGCTCCGCCGTCGAACCTGTTCGCCGGCTTCGAATTACCGGCGTTGGCCTCTGTATTGAGAGGCTCAAGAACATAGGTGAAGAACTAGAGGTTTATGCGAAGAACTTGGGGATCAATCTGGAATTCTCAGCAGTGCAAAAAAGCTTGGAAAATTTGCAGCCTGATGATGTAGAAATGCGTGAGGGTGAAGTTCTTGTTGTGAACAGCATTCTTCAGTTGCATTGTGTTGTGAAGGAAAGTCGTGGAGCTTTGAACTCAGTGCTTCAGATGATCCATAAGCTTTCACCAAAAGTGTTTGTTATGGTTGAGCACGATTCAAGCCACAATGGACCCTTCTTTCTTGGGAGATTCATGGAAGCACTGCATTATTACTCTGCGATTTTTGACTCGCTTGATGCTGTGTTGCCGAAGTATGATACAAAGAGGGCAAAAATAGAACAGTTTTACTTGGCGGAGGAGATAAAGAACATAGTGAGCTGTGAGGGAGCAGCGAGGGTGGAGAGGCATGAGAGACTGGAGCAGTGGCGGAGGAGGATGAGCCGGGCCGGGTTTCAGGCGGCACCGATCAAGACGGTGGCTCAGGCCAAGCAGTGGCTTCAGAAGAAAGAGGTCAGTGATGGGTATACGGTTGTGGAAGAGAAAGGATGCTTGGTGCTTGGATGGAAATCAAAGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTAA 1581 0.4497 MYPPLYRVAVKDEIGGGDDENSVFGLSLQLAAMGCYTYPRIPTSAASTNWILPRSVDDETKRDLKMIKRTISMSDLLEDFTSNHSSSGNNGDTRGSSNMNSLPRLHFRDHIWTYTQRYLAAEAVEEAAKEMIDSETHHEDEAEKDGCADGMRLVQLLIACAEAVACRDKSHASNLLSQLRSNALVFGSSFQRVASCFVQGLADRLALIQPIRAVGSVTPIMNIMDKASAKMEEAYKLMYEICPHIQFGHFVANSTISEAFEGQSFLHVVDLGMSLGLPHGHQWRALIQDLASRSAVEPVRRLRITGVGLCIERLKNIGEELEVYAKNLGINLEFSAVQKSLENLQPDDVEMREGEVLVVNSILQLHCVVKESRGALNSVLQMIHKLSPKVFVMVEHDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLPKYDTKRAKIEQFYLAEEIKNIVSCEGAARVERHERLEQWRRRMSRAGFQAAPIKTVAQAKQWLQKKEVSDGYTVVEEKGCLVLGWKSKPIVAASCWKC 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0434 526 MobiDBLite consensus disorder prediction 79 100 - -
Lele19g0434 526 Pfam GRAS domain family 153 525 IPR005202 -
Lele19g0434 526 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Lele19g0434 526 ProSiteProfiles GRAS family profile. 144 525 IPR005202 -
Lele19g0434 526 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 520 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0434 Lele-ChrLele19 2488570 2490150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0434 145 525 GRAS Transcription Factor Family AT1G14920 38.205 7.36e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele19g0434 GRAS 3.2e-114 CL0063