Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0428 ATGGAGTGCAACAAGGAGGAGGCTCTAAGGGCTAAGCAAATTGCAGAAAGTAGACTTCAAATTGGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAGGGCCCAAAAACTGTTTCCTGAAATTGAGAACATTGTTCATATCCTTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACTTTCTGGATCTGAAATGGATTGGTATGGAATTCTTCAGATTGAACAACTGGCAGATGAGGCAACCATTAAAAAACAGTTCAGGAAGCTCGCCCTGCTACTTCATCCTGATAAAAATAAGTTTTCAGGTGCAGAGGCTGCATTCAAGTTGATTGGAGAGGCAAATAGGTTGTTAAGTGACCAAGAAAAGCGGAAATTATTCGACATGAAGTATAGAGCCTTCACGAGAACTGTGTCATCTAAGCCCCCATATCATAATGCAAATGGAATTGTATTTGGCCCAAAACATGATGTACAAGCAAGAAATCATCAGAATTACTCACAACCCGCAAGTTGGAATTCCTATCAGCAGGCTGCTCAACAAACTTTCTGGACAACTTGTAGTTATTGTAAAACTAGGTATGAATACTACAGAACTGTTTTAAATGCAACCTTACGCTGTCACCAGTGTTCTAGACCCTTTGTAGCTCGTGAGATGGGATTTCAGCATGGTCCACCTGAATATAAGTGGACAACAGACCAGAAGGAATATTCAAATTTTGAATCCATGGCAAAATGCACTTATGGAGTTGATGGGCACTGTAAAGGTGGAAAGGGTGAAGATGGCAATGTGGCTGCAGGAAGGGCAAAGGTAGATGTTAGAACGTCCAAACCTGCTTCACCCAAAGTCAGGGAATCTCATTCCTCAACTCATATTGGGAGTAAGAGGAATAGGGAGTCAGTTCTGGATCCCAGAGAAAGTTGCAAGACTGAGAATGGTAATGGGTATAAAGATGCCAATGTTCAAGGAAGTGGTATTGATCCTTCTGGACCTAAAGCAGAAGCACAGTCTAGGAGGTCTTCCAGGCAAAAGAAGGGTGTTTCTTACTCTGAAACCTCCCGTGATGATGATTTTGAGAGTCCTTCTAAAAGGTGCCGACAAAATAGATCATCTAGCACCATAGCAATGGAGAAAAGAGAAGAACCTGCAAGTGGTGGGTTGTCTAAACACAATCAATCAGCTCGTCCTGTAGCTGGTCTGGGTGGTGAGAGTGGAGAGAAGAGCAATAAAGCAAGTGGTCTGCCTGAAGAAATATTGTTACAGAAGAGAAGCAAAATTGAGCAATCTCATGTACATAGAGAGGAGCCATCCAAGTCAAGTGTTGACGACACAAACACAAAAGCCGATCATGATCCTCCATTTGATTCAGCTGTCCCTTCTATTGCAGATATCATCAATTGTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAGGGCGGATAATTGTTTTGCTAAAGATCAGTTCTGGGCCATATATGATCCAAGTGATAGCATGCCAAGATACTATGCTCGTGTGAAGAAAGTGCTGTCTCCTGGATTCAAGTTGCAGATTACTTGGCTGGAGGCTGACCCAGATGATGAAGGTGAGATTGATTGGCAAGATGCAGAATTGCCTGTTGGTTGTGGTAAGTTCAGACTAGGTGACACTCAAGAAATTGAAGACCGTGCTATGTTCTCTCATCAGATGCATAATATAAAAGGAATTGGCAGAAGACGTTATATGGTATATCCTAGTAAAGGGGAAACATGGGCAATATTTAAAGATTGGGATATAAATTGGAGTTCTAATCCAGAAAAGCATTGTAAGTACGAATATGAATATGTGGAAATCCTGTCAGATTTCACAGAGAATGTTGGCATTAAAGTTGTGTATCTTGGCAAATTGGAAGGCTTTGTTAGCCTCTTTCAGCAAACTGAGCATACTGGACTTAGCTTATTTTGTATATCACCTAATGAGCTCTATAGGTTCTCACATCGAGTTCCTTCATTCAAAATGACTGGTGATGAAAGAGATGGTGTTCCTTGTGGATCTTTTGAACTTGATCCCGCTGGCTTGCCTGTTGATCTTTTTGGAGTTGGTAATACTGGGGATGTGGATATGGGAGATGAAATGTTAGATGCTGGGGTCAAAAGTTCAGGCTACAAATCCTCGGAACAAAAAGAGGAAAATAGGAGTGATGATGTTGAAAGAGCTTCCCCAATACTTAGAAGATCACCAAGGGGGTTTAACAGAAAAGATATGAATAATGGCCAAGTTAATAGAAGTCAGTATGTGACAAGAGAGAATGGTAGCAAAGACATTGGCTGCGTGGACGTAAGTCATCCTGATGGAACTGATGAGCCTAGTCATGAAGGGAAGATGCACAAGACAGACGATGTTCAAAAAGCTTCCTCAATACGCAGAAGATCACCCAGGGGATTAAAAAGCAGAAGTATGGAGAATGGTGGAGTAAATGAAAGTCAACATATGACAAGAGAGGATGGTAGCAAATATGTAGGTTGCAAGGACTTCAGTCAAGCTGAGGGAATTGCTGCTGCAGATCAGGCTGGCGAGAGGGTTAAAACACCAAAGAAACATGAGAAAAATGGTTGTGGAAGGGAAGGTTCGAATGTGCAAAGATCACCTAGAGATTTAAGCAAGAAAAAAGCCCAAGTAGATGCAAATCAATGTATGACTGGCAAGTTAAGTGGTGAACATTCAGATTCCAAAAAAGAGTTAAAGGATAGCAAATTTTCTGAGTCTTTCGGAGGCGTTTGCAGACCTTTCACTGAAGATTGCAAAGTTCCAAAAGCATCACGCTTTATGGTTAAATCTGAAGAAATGTTTCAGCGTGGTCAGATATGGGCATTATATGGTGATAAGGAACGGATGCCCAACACTTATGCACAAATTAAGAAGCTTGATTTTGCCCCTGATATCAGATTGCATGTGGCCTTTCTTGAACCCTGTTCACTGCCTAAAGGCATAACTGGCACGGTAGCTTGTGGTGCCTTTAAGGTTAAGAATGCTAAATCCCTTGTCGTCTCCATTTCTAATTTCTCTCATCAGTTAAGGCTTGATCCCAGGAAAGATAATAGATATGAAATTTATCCAAGGAAAGGTGAGATATGGGCGTTATACAAGAACCAGCATCGTGGATCAACTTGTTCAAATCAGGTGAGAGGTGATTGTCACATAGTGGAAGTGTTGGAAGATGATGATGAGAATTTAAAAGTTGTGGTTCTGGTTCGTCATAACGACTCTAGGCCACTTTACAAGACTCCTGGAACTCAGAGATCTAAAATTGCTATAATTAATATAACAAGGGTGGATGCATTTAGATTTTCTCACCAGATTCCTGCTTTTAAGCACACTGAAGATGGCGAAACTCATCTCAAAGGATGTTGGGAGCTTGATCCTTCATCAATTCCAGGTTTTGTAATAAATTTAGACTGA 3438 0.4127 MECNKEEALRAKQIAESRLQIGDFVGALKFATRAQKLFPEIENIVHILTVCEVHCAAQKKLSGSEMDWYGILQIEQLADEATIKKQFRKLALLLHPDKNKFSGAEAAFKLIGEANRLLSDQEKRKLFDMKYRAFTRTVSSKPPYHNANGIVFGPKHDVQARNHQNYSQPASWNSYQQAAQQTFWTTCSYCKTRYEYYRTVLNATLRCHQCSRPFVAREMGFQHGPPEYKWTTDQKEYSNFESMAKCTYGVDGHCKGGKGEDGNVAAGRAKVDVRTSKPASPKVRESHSSTHIGSKRNRESVLDPRESCKTENGNGYKDANVQGSGIDPSGPKAEAQSRRSSRQKKGVSYSETSRDDDFESPSKRCRQNRSSSTIAMEKREEPASGGLSKHNQSARPVAGLGGESGEKSNKASGLPEEILLQKRSKIEQSHVHREEPSKSSVDDTNTKADHDPPFDSAVPSIADIINCPDPDFSDFEKDRADNCFAKDQFWAIYDPSDSMPRYYARVKKVLSPGFKLQITWLEADPDDEGEIDWQDAELPVGCGKFRLGDTQEIEDRAMFSHQMHNIKGIGRRRYMVYPSKGETWAIFKDWDINWSSNPEKHCKYEYEYVEILSDFTENVGIKVVYLGKLEGFVSLFQQTEHTGLSLFCISPNELYRFSHRVPSFKMTGDERDGVPCGSFELDPAGLPVDLFGVGNTGDVDMGDEMLDAGVKSSGYKSSEQKEENRSDDVERASPILRRSPRGFNRKDMNNGQVNRSQYVTRENGSKDIGCVDVSHPDGTDEPSHEGKMHKTDDVQKASSIRRRSPRGLKSRSMENGGVNESQHMTREDGSKYVGCKDFSQAEGIAAADQAGERVKTPKKHEKNGCGREGSNVQRSPRDLSKKKAQVDANQCMTGKLSGEHSDSKKELKDSKFSESFGGVCRPFTEDCKVPKASRFMVKSEEMFQRGQIWALYGDKERMPNTYAQIKKLDFAPDIRLHVAFLEPCSLPKGITGTVACGAFKVKNAKSLVVSISNFSHQLRLDPRKDNRYEIYPRKGEIWALYKNQHRGSTCSNQVRGDCHIVEVLEDDDENLKVVVLVRHNDSRPLYKTPGTQRSKIAIINITRVDAFRFSHQIPAFKHTEDGETHLKGCWELDPSSIPGFVINLD 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0428 1145 MobiDBLite consensus disorder prediction 702 828 - -
Lele19g0428 1145 SMART dnaj_3 66 123 IPR001623 -
Lele19g0428 1145 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele19g0428 1145 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele19g0428 1145 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 420 450 - -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 773 800 - -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 846 907 - -
Lele19g0428 1145 CDD DnaJ 67 120 IPR001623 -
Lele19g0428 1145 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele19g0428 1145 Gene3D DnaJ domain 52 143 IPR036869 -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 716 744 - -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 288 312 - -
Lele19g0428 1145 Pfam Domain of unknown function (DUF3444) 926 1120 IPR024593 -
Lele19g0428 1145 Pfam Domain of unknown function (DUF3444) 464 670 IPR024593 -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 745 763 - -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 337 364 - -
Lele19g0428 1145 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 258 461 - -
Lele19g0428 1145 Pfam DnaJ domain 67 128 IPR001623 -
Lele19g0428 1145 MobiDBLite consensus disorder prediction 852 867 - -
Lele19g0428 1145 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0428 Lele-ChrLele19 2452123 2455560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0428 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.032 1.07e-25 108