LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele19g0419	ATGACCTCCCCCACCACCACCACCACCGGTCTCGGCGATGGCGCCGATGATCGACTCATAGCCACGGCTCAGCAGATCCTCAGGAGCCTCAACGCTCCTAAGGAGGTTCGTCAAGACATGCTTTTGATATTCTCTAGCTTTGATAATCGCCTCTCCAGTATCACTGATCTCATCAACGGCGAAGATTCCAAGTCTTCTGCGGCTGAAGAAGACCTTGACCGCTTCCAAGCGGCTGAGAAAGTCATCCTTCGCTGGGACGGGTCCGGTTCTGGAGCAGCTCCCCGCCCATCTAGCTCCCTTCTCCATTCTCGGGATGACGTTGTCGAGTATTTATCTGCGGTCGACGACATTATTCAGTGGATTGAACAAATTTCGATCGCACCCTCCGGTAAAGAGACTCAAGTCCTGATCGACCGGGCGGATAACGCGATCCAGCTTGCCATGTCGAGGCTAGAGGACGAGTTGCGGCATGCCTTGATTAGGAACACGGTTCCACTTGACGCTGACAGGCTCTATGGGTCGATCAGAAGGGATAGTATCTCGTTCTCATCGAATTATGAGGGGCTTGGCGAGAATTTTGAAAGCTTCGATGAGGTCAATGATTGCGATTCTGCGCGGTTTCATGAACGCGGTGCGAGCTTGGCCGACGATGTCTTCGTTGATTTGATAAACCCAGACGGGGTGGAAGAGCTGAAAGAGATCGCCGAACGAATGCTCAAGTCTGGCTACGAAAGTGAGTGCCTTCAGGTTTATGTCAACATTCGTCGTGACGCCTTGGATGAGTGCTTGGCTATCCTGGGTGTCGAGAGGCTGAGTATCGAAGAGGTTCAGAGGATTCAGTGGGACTCGTTGGACGAGAAAATGAAGAAATGGATATACGCTGTTAAAATTGTTGTTAGGGTGCTACTCACCGGCGAGAAAAGGCTATGTGATAGTATATTTGAAGAATACAGTGAGGCCTGTTTCAACCACACTGCAAAAGGGTGTATTATGCAGTTGTTGAATTTTGGTGAGGCCGTTGCAATTATTCGAAGAGCACCGGAGAAGTTGTTCAGGATATTAGATATGTACGAGGCTTTGGGGGATGTGTTACCTGACCTGGAGGCTTTGATTTCAGATGAGTTTGTGATCAGTGACGCCAAAGGACTACTAACTGTACTCGGTGAGGCGGCTAAAGGTTCATTTGCTGAGTTTGAGAATGCGGTTCGTAATGAGACTTCCAAAAGGCCAGTCTTAACTGGGGGTCTTCATCCCTTGCCACGTTATGTGATGAACTACATGAAGTTGCTAATGGATTATAGTGACTCCCTCGACTCACTTTTAGAGGTAAGTGAAGAGGATCTCGATCGATTTCAAAACATTCATGGCGGTGACAGTTCTCAGTTGGAGACCATGTCCCCCTTACGTCGGAGAATGCTGTTATCAATGTCAGAGCTTGAGTATAATCTTCAGGAAAAATCTAGAATCTATGAAGACAATGCAATGCAGTATATATTTTTGATGAACAATATTTATTACATTGTCAAAAAAGTGAAAGACTCAGATCTTCGGCACGTCCTAGGAGATGACTGGGTTCGAAAGCGCCGTGGTCAGATACGCCAGCATGCTACAGCCTATCTCAGGGCCTCTTGGACCAGGGCATTGGCCTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCCTCAAAGAATGCTTTGAAGGAAAGATTCAAGAATTTCAATGCATGCTTTGAGGACATATACAGGATTCAGACTGCTTGGAAGGTGCCTGATGCTCAGCTTCGGGAAGAATTACGAATCTCTATATCAGAGAAGGTGATTCCTGCGTACCGCTCGTTTGTGGGAAGGTTTGGTAGTCAGCTAGAGGGAAGACATGCTGGGAAGTACATTAAGTATACAGCTGATGATTTAGAAGGCTTTTTATTGAACTTATTTGAAGGAGAGCCTAAAGTGTTGCATCATGTGAGGAGAAAGAGTACATAG	1989	0.4731	MTSPTTTTTGLGDGADDRLIATAQQILRSLNAPKEVRQDMLLIFSSFDNRLSSITDLINGEDSKSSAAEEDLDRFQAAEKVILRWDGSGSGAAPRPSSSLLHSRDDVVEYLSAVDDIIQWIEQISIAPSGKETQVLIDRADNAIQLAMSRLEDELRHALIRNTVPLDADRLYGSIRRDSISFSSNYEGLGENFESFDEVNDCDSARFHERGASLADDVFVDLINPDGVEELKEIAERMLKSGYESECLQVYVNIRRDALDECLAILGVERLSIEEVQRIQWDSLDEKMKKWIYAVKIVVRVLLTGEKRLCDSIFEEYSEACFNHTAKGCIMQLLNFGEAVAIIRRAPEKLFRILDMYEALGDVLPDLEALISDEFVISDAKGLLTVLGEAAKGSFAEFENAVRNETSKRPVLTGGLHPLPRYVMNYMKLLMDYSDSLDSLLEVSEEDLDRFQNIHGGDSSQLETMSPLRRRMLLSMSELEYNLQEKSRIYEDNAMQYIFLMNNIYYIVKKVKDSDLRHVLGDDWVRKRRGQIRQHATAYLRASWTRALACLKDEGIGGSSSNASKNALKERFKNFNACFEDIYRIQTAWKVPDAQLREELRISISEKVIPAYRSFVGRFGSQLEGRHAGKYIKYTADDLEGFLLNLFEGEPKVLHHVRRKST	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele19g0419	662	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	64	649	IPR004140	GO:0000145\|GO:0006887
	Lele19g0419	662	Pfam	Exo70 exocyst complex subunit	289	644	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Lele19g0419	662	Gene3D	Exocyst complex component Exo70	99	655	-	-
	Lele19g0419	662	SUPERFAMILY	Cullin repeat-like	73	648	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele19g0419	Lele-ChrLele19	2402256	2404244	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele19g0419	17	661	EXO70 exocyst subunit family	AT5G50380	59.763	0.0	773