Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0407 ATGGAGAACAACCAGCAAGCCCAGTCCTCCGCGTACCCACCTCAAACCCCTGCTCCTCCCCCTTTCCACCACCTTCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCTTACCAGCGCCAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCCCTTGCTCGAATCAAGAAGATCATGAAGGCCGATGAGGACGTCCGCATGATCTCCGCCGAGGCCCCCATTTTGTTCGCCAAGGCCTGTGAGCTTTTCATCCTCGAGCTCACCATTCGCTCTTGGCTCCACGCCGAGGAGAACAAGAGAAGGACCCTTCAGAAGAACGACATAGCCGCTGCCATCACCAGGACTGATATCTTTGATTTCTTGGTCGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGCACCACCGCCAGCGGTGTCCCTTACTATTATCCTCCCATGGGCCAACCTGCTGGCCCACCCGGAGGCATGATTATTGGACGGCCGGCCGTCGATCCCACAGGAGTCTACGTGCAACCACCATCGCAGGCTTGGCAGTCGGTATGGCAGACAGCCGCTGAGGATGGATCATACGGCAGCGGTGGCAACAGTGGACAGGGCAACCTTGATGGTCAGAGAGGTTTGAACTTGTTACCTAGTAACTTCTGTAAACCACTCCATATGGGATCTTATTTATCTGGGATTATATAG 726 0.5482 MENNQQAQSSAYPPQTPAPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGNSGQGNLDGQRGLNLLPSNFCKPLHMGSYLSGII 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0407 241 Pfam Core histone H2A/H2B/H3/H4 26 117 IPR007125 GO:0003677
Lele19g0407 241 FunFam Nuclear transcription factor Y subunit gamma 23 132 - -
Lele19g0407 241 SUPERFAMILY Histone-fold 19 126 IPR009072 GO:0046982
Lele19g0407 241 MobiDBLite consensus disorder prediction 1 22 - -
Lele19g0407 241 Gene3D Histone, subunit A 22 132 IPR009072 GO:0046982
Lele19g0407 241 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0407 Lele-ChrLele19 2342435 2343421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0407 22 217 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.119 3.41e-109 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele19g0407 CBFD_NFYB_HMF 2.6e-17 CL0012