Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele19g0370 | ATGCCTTTTGAAATAATTAACCAGAGGGGCATATCTGCCTCGTCCCACCTTTTTGATGACAATTCCTTTTTTCCTGAGAGGAGTGTTGGATTGCAGAAGCCAAAATCCTTTCATGATCATTATTTAAAAGGGAAAATGGAAGCATCACCCCGCGGCATTTCAAGTACATCATCATCTCTAGAAATGAATGCTAACTATGGCTTGCCAATGTCACAAACAAGTTTGTCAGAAGAAGTTACAGAAAAGCTGCATGTTGGGGGAGGAGGCATCATTGATGTGTTGAAGTCTACCAAGGAATCATTGAATCAGCACCCCATATCATGGTCTAATGTGCATGTGCATATGCAACCAGAATCTACATCTTATAACTTAACTGGAAAAAAGATCCTCACTGGTACTGCTTCTCATGAGAGCAGCCTATTCTCTAGCTCACTGTCTGAGATATTTAGCCAAAAATTGAGGTTATCTCGGAATGATATGTTGTCTCGTCAGCCTGTAACCATTGGTTCGTTTCCTGAGGAAGAACCATATAAATCTCTTGAAGAAATTGAGGCAGACACTATCGGGAATCTCCTTCCTGATGAAGATGATCTGTTTTCTGGTGTTACTAATGAGTTAGGATACGCTGCCAATGCCAGAACAAGTGATGACTTTGAGGAGTTTGATTTATTTAGCAGTGGCGGAGGCATGGAACTTGAAGGAGATGAACATCTAAGTTTGGGAAAGAAAATCGGTAGTCGGGATGTGGATTCTGGTTATTTTGGAGGTTTTAAAGGAAAACTTCCTTTTGGTGAACAACCTTCTAGAACACTTTTTGTTAGAAACATCAATAGCAATGTTGATGATTCTGAGCTAAAGGCTCTTTTTGAGCAATATGGAGACATCCGAACCATTTATACAGCCTGCAAGCATCGTGGGTTTGTGATGATTTCTTACTATGACCTAAGGGCAGCACAAAATGCAATGCAAGCCCTTCAGAATAGGTCATTGAGGTCTAGGAAACTGGATATTCATTATTCAATTCCAAAGGGCAATGCTCCTGAGAGGGATATAAGCCATGGCACGCTAGTGCTATCTGGTCTTGATTCTTCTGTTGCAAATGATGAGCTTCAAAAGATTTTTGGATTTTATGGAGAAATAAAAGAAGTCTATGAATCTCCCGAAGTAAATTGTAAAAAAATTATTGAATTTTATGACGTGCGAGCTGCAGAAGCTGCTCTTCGTGCATTAAACAGAAGTGACATTGCTGGTAAGCCGATCAAAATTGAACCTGGCCATCCTCGGGGAACAACATGTCTGACGCATGAGTCTAACAGTGGCCAAGATGAACCTGATTTTGGTCAAAGTCTCTGTAACTTATCACTAAGACAAAAGGCAACGATGTCTTCTGGAGTAATTACTTCTGGCTGCTTAGAAAATGGACCTAATTCAGGATTTCGCTCTGCAATCCAGCAACCTATTAATGCATTGATTGATAATGCGTTCTCTCCTGTGAATTCTAGCATCCACAAATCAGTGAGAGGGCCAACTTCTGGAAAAGTGCCTGGTGTTGGCGATTCCATTAACTTCCTCGATGCAATGAAATTTGCTTCTGTTCCAAGATTCCATCCTCATTCCCTCCCTGATTATCATGATAGTTTTGCTAATGGTAGTGCTTACAACCTTTCAAGCATTGTTGGCAATGTGGCTGGCAATATTGGTACTGCAGTGACTGACAGCTCAGATAGCAGGCACAATCTGGGAATAGGTTCAACTGGGAATCTGATGGAATTTACTGGAGCAGGAAATGGGAACCATGAACGTCATGGACTTTATCATGTGTGGAACAGCTCCAATTTGCATCAGGAACCTTCACCAAATCCTCTGCTTTGGCAGAAAACACCATCTTTTGTTAACGGTGCTTGTGCTCCTGGCCTTCCGCAAATGCCTGGCTTTCCTAGAACACAGCCTCACATGCTGAGAGCATCACATATGGACCATCATGTTGGGTCAGCTCCTGTTAATGCCTCACCCTGGGACAGGCAGCACTCTTATTTGGGAGTATCTCCTGAAACTTCTGGTTTTCGTATGGGTTCTCTGGGAAGTTCTGGTTTACCTGGTAGCTGGCAATTGCATCCTCCAGATTTTTCTTCTCACAACATGTTTCCTCATATCGGTGGAAATGGTGCAGAATTGACCCCAACTGCTGGGCAAAACTCTCCTAGTCAGTTGTCACATGTTTTCCCTGGGGGACATCTCATGACTTCTATGTCCAAACTTGATTCCAATGAACGAATGAGGAACCTATATCCCTTCCGGAAAAGTGAAGCTAACGCTAATAATGCTGATAAAAAGCAATATGAACTTGATCTGGGCAGCATAATGCGTGGGGAAGACAGCCGAACAACTCTCATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTAGCTGCTATAGATGAGCAATGTCGGGGAACTTATGATTTTCTATATTTGCCAATTGACTTTAAGAACAAATGTAATGTTGGCTATGCATTTATTAATATGATAGATCCTGCTCAGATCATTCCATTCCACCAGGCTTTTAATGGGAAAAAATGGGAGAAATTTAATAGTGAAAAGGTGGCCTCACTTGCATATGCCCGAATTCAGGGTAAAGCTGCACTTATTGCTCACTTCCAGAATTCAAGCCTGATGAATGAAGACAAGCGTTGCCGTCCTATTCTGTTCCACACAGATGGCCCGAATGCTGGTGATCCGGAGCCCTTCCCCATGAGTACTAACATTAGAATGAGGCCCGGAAAATCTCGCGGTAGTAGTAATAACGAGGAGAATCGCAGCCAGGGTTGTCCTTCAACTTTGGCAGGCGGAGAGGGATCTACTACTAATGTAATAGATTCTTCATTGAGCTCTTAA | 2904 | 0.4218 | MPFEIINQRGISASSHLFDDNSFFPERSVGLQKPKSFHDHYLKGKMEASPRGISSTSSSLEMNANYGLPMSQTSLSEEVTEKLHVGGGGIIDVLKSTKESLNQHPISWSNVHVHMQPESTSYNLTGKKILTGTASHESSLFSSSLSEIFSQKLRLSRNDMLSRQPVTIGSFPEEEPYKSLEEIEADTIGNLLPDEDDLFSGVTNELGYAANARTSDDFEEFDLFSSGGGMELEGDEHLSLGKKIGSRDVDSGYFGGFKGKLPFGEQPSRTLFVRNINSNVDDSELKALFEQYGDIRTIYTACKHRGFVMISYYDLRAAQNAMQALQNRSLRSRKLDIHYSIPKGNAPERDISHGTLVLSGLDSSVANDELQKIFGFYGEIKEVYESPEVNCKKIIEFYDVRAAEAALRALNRSDIAGKPIKIEPGHPRGTTCLTHESNSGQDEPDFGQSLCNLSLRQKATMSSGVITSGCLENGPNSGFRSAIQQPINALIDNAFSPVNSSIHKSVRGPTSGKVPGVGDSINFLDAMKFASVPRFHPHSLPDYHDSFANGSAYNLSSIVGNVAGNIGTAVTDSSDSRHNLGIGSTGNLMEFTGAGNGNHERHGLYHVWNSSNLHQEPSPNPLLWQKTPSFVNGACAPGLPQMPGFPRTQPHMLRASHMDHHVGSAPVNASPWDRQHSYLGVSPETSGFRMGSLGSSGLPGSWQLHPPDFSSHNMFPHIGGNGAELTPTAGQNSPSQLSHVFPGGHLMTSMSKLDSNERMRNLYPFRKSEANANNADKKQYELDLGSIMRGEDSRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFLYLPIDFKNKCNVGYAFINMIDPAQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMSTNIRMRPGKSRGSSNNEENRSQGCPSTLAGGEGSTTNVIDSSLSS | 967 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele19g0370 | 967 | CDD | RRM1_MEI2_like | 268 | 343 | IPR034453 | - | |
Lele19g0370 | 967 | SUPERFAMILY | RNA-binding domain, RBD | 266 | 428 | IPR035979 | GO:0003676 | |
Lele19g0370 | 967 | Pfam | RNA recognition motif 2 | 794 | 890 | IPR007201 | - | |
Lele19g0370 | 967 | Gene3D | - | 350 | 445 | IPR012677 | - | |
Lele19g0370 | 967 | FunFam | Protein MEI2-like 1 | 353 | 447 | - | - | |
Lele19g0370 | 967 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 354 | 427 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 62 | 941 | - | - | |
Lele19g0370 | 967 | SUPERFAMILY | RNA-binding domain, RBD | 796 | 881 | IPR035979 | GO:0003676 | |
Lele19g0370 | 967 | MobiDBLite | consensus disorder prediction | 928 | 967 | - | - | |
Lele19g0370 | 967 | MobiDBLite | consensus disorder prediction | 908 | 967 | - | - | |
Lele19g0370 | 967 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 269 | 342 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | FunFam | MEI2-like protein 5 isoform 2 | 258 | 352 | - | - | |
Lele19g0370 | 967 | CDD | RRM3_MEI2_like | 797 | 882 | IPR034454 | - | |
Lele19g0370 | 967 | Gene3D | - | 263 | 349 | IPR012677 | - | |
Lele19g0370 | 967 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 356 | 421 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 271 | 335 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | SMART | rrm1_1 | 355 | 423 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | SMART | rrm1_1 | 796 | 872 | IPR000504 | GO:0003723 | |
Lele19g0370 | 967 | SMART | rrm1_1 | 270 | 338 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele19g0370 | Lele-ChrLele19 | 2180997 | 2187019 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele19g0370 | 264 | 423 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 25.946 | 2.27e-09 | 59.3 |