Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0355 ATGGCAGCTTTTTCATTCCAATACCACCCTTTCCTTGTTGACTCTCCATTTTTCTCTAGTGCTCCCCTTAAGATGACAGCTTTCACTGATCAGCCTCAGGTTCATACAAATCCTGCTCCTCAGTTTCACGAGACATCTTTAGAGAATTGCTTCGTTGATCAAGCCAAGTTTAACATGAGTGATAATGAGCCTTCCTTGGGAAGCAAAAACCAGAGCCCGGAGACCTCTGTGGTATTGGATAAGCTTGAACCTGGTGAGCAGGTCACTCAGAAGGTGACTCCCATGGAGAAGAAGAAGAGAAACAGGAATCGTTCTTCCTTGAGTCGTCCTCAATCTAAGGGAGCTACCGGAGAAAGAAACAAGAGACAAAAGAAAAGCAATAATGGTGAAGTGAAGGAAGGAGTGAAAGAAGGAGATAAGCCAAAAGATGAGATGAAGAATCAGAAGAAGAGTCCTGAAGAAACTCCAACAGACTATATCCATGTAAGAGCAAGAAGGGGTCAGGCCACCGATAGCCACAGCCTAGCTGAAAGGGCAAGAAGAGAGAAGATAAGTGAGAGGATGAAGATGTTGCAGCGACTTGTGCCAGGTTGTGCTAAGGTGACTGGAAAAGCCCTCATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTGGAGTTCTTGTCCATGAAGCTTGCTTCTGTGAATCCCATGTTCTATGACTTCACAATGGACCTTGACTCCCTCATGGTCAGGCCCGAGAAATCAAATTGTGTAGCATCGCCACTACCATCTGGGCAACAATGCAGCCTCCACCAGGCCACAACTTTTGCGGATACAACAACCACCGTTACCGCCAGCTTTCCGACTGTTAATGACTATCCGTTGGACACTTCAGCTTCTCTTTTCCTTCAAGGACAGCGGTCTAATGTCTTATCAGAGGACACAGAGGATTTATCTTTTCCAGAAGAGGTTGATGCTGCTATGATCACGTTACTTGACATGACAAGCTACGCAGTTTTCTGTTCAGTTAGCTATATGTATATGTTATCTGCAGAATCTTCAGAGATTAGGCCTATGAATAACAGAATTTCATCAATAAGTTCGGAAGATGCTGGTGGGGAAACATAG 1122 0.443 MAAFSFQYHPFLVDSPFFSSAPLKMTAFTDQPQVHTNPAPQFHETSLENCFVDQAKFNMSDNEPSLGSKNQSPETSVVLDKLEPGEQVTQKVTPMEKKKRNRNRSSLSRPQSKGATGERNKRQKKSNNGEVKEGVKEGDKPKDEMKNQKKSPEETPTDYIHVRARRGQATDSHSLAERARREKISERMKMLQRLVPGCAKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFTMDLDSLMVRPEKSNCVASPLPSGQQCSLHQATTFADTTTTVTASFPTVNDYPLDTSASLFLQGQRSNVLSEDTEDLSFPEEVDAAMITLLDMTSYAVFCSVSYMYMLSAESSEIRPMNNRISSISSEDAGGET 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0355 373 Gene3D - 165 237 IPR036638 GO:0046983
Lele19g0355 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Lele19g0355 373 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 59 269 IPR024097 GO:0006355
Lele19g0355 373 CDD bHLH_AtBPE_like 158 243 - -
Lele19g0355 373 SMART finulus 174 224 IPR011598 GO:0046983
Lele19g0355 373 MobiDBLite consensus disorder prediction 58 77 - -
Lele19g0355 373 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
Lele19g0355 373 FunFam Basic helix-loop-helix transcription factor 165 237 - -
Lele19g0355 373 MobiDBLite consensus disorder prediction 58 160 - -
Lele19g0355 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 235 IPR036638 GO:0046983
Lele19g0355 373 MobiDBLite consensus disorder prediction 115 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0355 Lele-ChrLele19 2070658 2073792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0355 1 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 43.729 1.37e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele19g0355 HLH 3.2e-06 No_clan