Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0352 ATGCAAAAGATCATTTATAGTTTGAAATATGAAGTTCTTCTTGAGAACAGGGGAAGATCAGACCATGACATTTTTGGCTGCAAAAGCAACCATGCCTACAAGGATGGGGCCAAAGTGTCCCTGTTTGGTAAGTTCACAAGATTACTGTATACTATTTTGTCTGCTTTTGACCCTCGCATCAGCGCCCAAACTTCAGTGGAAGTTACACTGCTTGCACCAACTTCTCCATCTGTAGCTAAATCCCCTGGATGCAAGATGGATGATGGCCACCCGCGTGAAAATGGCAGACAGAAGGTGGACTACTATAGAGGAGCTCATTCCCTGTGGAATATGGCTCCCCAGCATCAGGTAAAGGAACCAAATGCCCTGGTTATGAATAAGAAAATTATGTCTGTTATTGCTGAGAGAGAAGCTGCAATTCGAGAACGGAATGCGGCTTTATCCGAAAAGAATGAAGCCTTAGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTTCTACAGAGGGATAATGCCTTGATGGAACGGGATAATGCTCTCGCCGCCCTTCAAATCCAGGATAATGCTACCAACTTCTCATTGGGCTGTGGCACTCAACTTGGATCAAAGCGGATGCATCATTCCTCAAATCACTTCAGTCAAATGGCAGAAGGCGCTTACAGAACAAAGGATTTGGCCACAACCAATGCCTTCCCGGTAACTATTGTAGCTTCTGAAGCGGGCAAGAATAGTCAGGCTAATAAGAGAACAAGGGAGAACAAGGCAGATTCTTCTAAGGCATCAAAACCACTAGGAAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCGGTCTTCTTCTGAAGTGACAAAGATCAAATCTGAGTGGGATAAACAGGATGTTGGATTGAATTTGATTCAATTTGATGAAAATACCATGCCAGCCCCTGTTTGCACATGTACCGGAGTACCACGGCAATGCTATAAATGGGGGAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTGTCCATGTATCCGCTACCGCAGCTTCCGAACAAGCGACATTCACGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTTAGCAGGGTGGCGGTTCAAGGCCGTGATTTATCCTTACCATTAGATCTCAAGGACTACTGGGCCAGACATGGAACGAATCGCTACATCACGATCAAGTAA 1206 0.4577 MQKIIYSLKYEVLLENRGRSDHDIFGCKSNHAYKDGAKVSLFGKFTRLLYTILSAFDPRISAQTSVEVTLLAPTSPSVAKSPGCKMDDGHPRENGRQKVDYYRGAHSLWNMAPQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNALAALQIQDNATNFSLGCGTQLGSKRMHHSSNHFSQMAEGAYRTKDLATTNAFPVTIVASEAGKNSQANKRTRENKADSSKASKPLGKGKKVSEDLNRRSSSEVTKIKSEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHSRVGGRKMSGSVFTRLLSRVAVQGRDLSLPLDLKDYWARHGTNRYITIK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0352 401 PANTHER - 94 401 IPR010409 -
Lele19g0352 401 SMART GAGA_bind_2 86 401 IPR010409 -
Lele19g0352 401 Coils Coil 144 177 - -
Lele19g0352 401 MobiDBLite consensus disorder prediction 247 286 - -
Lele19g0352 401 Pfam GAGA binding protein-like family 98 401 IPR010409 -
Lele19g0352 401 MobiDBLite consensus disorder prediction 243 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0352 Lele-ChrLele19 2051047 2055297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0352 86 401 BBR or BPC Transcription factor family AT2G21240 58.044 2.36e-131 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele19g0352 GAGA_bind 1.4e-98 No_clan