Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0348 ATGAATTTTTTGAAGAATGGAGTTTGCAGATTGCCTCCCGGATTTAGGTTCCAGCCAACAGACGAAGAACTCGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATGTCCACTTCCTACATCCATCATTCCTGAAGTCAATAATGTCTGCAACTACGATCCTTGGGATTTGCCAGAAACCAGTGCTCCAAACTCAACCCACCTGAGTCATGGGAAGGAGGTAGGAGATTGGGTTCTGTGTCGGATAAGCCTGAAGACGAGAAGAGAAGGTGGTGGTGAGGGAGAGAGAAGATTCTTTGATTTCATGAGTGTACAAAGGGTTGCGGCAGAACAACATTATTCTGACGTGTCATCGTCTTGTTCAAGTTCAAGTGACATTACAGAGATGTGTTCAGATGCAGAAAAGCACAATGATACGCAGAAAGCAGAGGAAGAAACAGTTGCAGAGAATTATGAACATGAACAAATAGAAGAGAAAAAAGATTATCTGATTTCGGCAGACTCGAATGTCGAGGATACCCAAGCTTTAGAATTTATTGTCTTCCTCCCCAGATCAATGACAATGACGAAAGTGAGTGTTTTCTGCAAATTCAAACAAAATTGA 603 0.4179 MNFLKNGVCRLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEVNNVCNYDPWDLPETSAPNSTHLSHGKEVGDWVLCRISLKTRREGGGEGERRFFDFMSVQRVAAEQHYSDVSSSCSSSSDITEMCSDAEKHNDTQKAEEETVAENYEHEQIEEKKDYLISADSNVEDTQALEFIVFLPRSMTMTKVSVFCKFKQN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0348 200 Gene3D NAC domain 20 70 IPR036093 GO:0003677|GO:0006355
Lele19g0348 200 SUPERFAMILY NAC domain 8 82 IPR036093 GO:0003677|GO:0006355
Lele19g0348 200 Pfam No apical meristem (NAM) protein 12 62 IPR003441 GO:0003677|GO:0006355
Lele19g0348 200 PANTHER NAC TRANSCRIPTION FACTOR 56 11 60 - -
Lele19g0348 200 ProSiteProfiles NAC domain profile. 11 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0348 Lele-ChrLele19 2035623 2038509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0348 1 77 NAC Transcription Factor Family AT5G13180 52.222 1.05e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele19g0348 NAM 9.7e-13 No_clan