Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0327 ATGGTACAGCGACCCTTTTCTTTTGCTCTGCTACCTTTCAATTCCTTCTCTTTCATATCTTTTCACACCCCACAATTCCCGTTTAGTGCTTTCCTTATATTTCAAGTTGCGGCATTGCTTGATTGCTGCCAAAATTCGGGTCTAGGGGTAAAACCTGGATTTTTTGTTGTTTATGAAAGAGTTGCAGGGATGGATGATTGTCGTCACCAAGTTACGTTCATTGGCCAGCATGAGGAAAATGAAAGTAAACTTTTATTGGACATTCCAAAAGATTTGAAAGATGTTGATGAAGAAACTATCAACACTGAAACTTTATTCATACCAGTATTTAAGAAAAGAAAGCGACTTAGCCTTAATCAGCTCAGAGAGATAAAAGCGGGGTTAGGTGGGAAGCAGACACAAACTAGTAGCAAGCTTCAAACAAAGAAGCATGAGAGTAGAGACAGATGGACATCTGAGAGATATAAGCTTGCTGAGCAAAGTATGTGGGAGGTCTTGAAGGCTAAAGGGGCAACGTTTGCCAACCCAATCTCCCGACCTGCACTTCGGACAGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGTGGGACTGAGCGTTTTAGGCGGTGGTTTAACACCAAAGGAATCATGGAGTACTGGTTGGAGAGTGCTAACCTAGATAAGGTCCGCCAAGATGCTGGGGTGCAGGACCCCTACTGGATTCCGCCACCTGCATTTAAAGCAGGCAGTCCCCCTATTCAGAATTCTGATTCTTCTGGCGAACTGAAACTGCTTCAAACAGAAATGGCCAAAATGAAGAAAGACATGCAGGAGCTCATAATAATCAAGAACCAAGAGAAAAATGAAATTAATATGATGGAGGAGACACACAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTTGACTTCTTTGAAGGGTGTACAGGGCATGTATGGTGATTTGGTAATTTGGAAAAGTAAAGTTGAGCAACAGCTTTTGGAAATAACAAATAAATTGAGTGATCTGAAAGCATCAAGGGAAGGCACAACCAATCCTCCTTTAGAAAGATGGGAAGATTGGCTTGAAAGCACCAATCTAGAGAATATTCAGGAAGATGATGAGCTTATACCATGGTTTGGGAGTACGGAACTGGTTAATCTTGAGCAAGAAGTTGCCCTTCAAGATCACTCAGCCCTACCTAGTCAGCTGCTCAATGACAATCTGACTAACATGAAGAGTGATTTGCTGCAAATGTTGCCCAACAAACGAGAGGAAGATCAACCTAATGTGACTCCGGATTCTTCTATGACTGATAATTCAAAGTCAGATCTTGACAACCCAGTGATGATGTTTCAGGAGATGCTCACGGACTTGTTTAAATGGAAAGACAAGATGGAGAAGCAGATGGCCGAGCTATCAAATTATGTATATGGAATGCTGGCGACCAAGGAGCTCCACTTTTAA 1509 0.4241 MVQRPFSFALLPFNSFSFISFHTPQFPFSAFLIFQVAALLDCCQNSGLGVKPGFFVVYERVAGMDDCRHQVTFIGQHEENESKLLLDIPKDLKDVDEETINTETLFIPVFKKRKRLSLNQLREIKAGLGGKQTQTSSKLQTKKHESRDRWTSERYKLAEQSMWEVLKAKGATFANPISRPALRTAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESANLDKVRQDAGVQDPYWIPPPAFKAGSPPIQNSDSSGELKLLQTEMAKMKKDMQELIIIKNQEKNEINMMEETHKELVKWKAMTEQRLTGILTSLKGVQGMYGDLVIWKSKVEQQLLEITNKLSDLKASREGTTNPPLERWEDWLESTNLENIQEDDELIPWFGSTELVNLEQEVALQDHSALPSQLLNDNLTNMKSDLLQMLPNKREEDQPNVTPDSSMTDNSKSDLDNPVMMFQEMLTDLFKWKDKMEKQMAELSNYVYGMLATKELHF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0327 502 Coils Coil 340 360 - -
Lele19g0327 502 MobiDBLite consensus disorder prediction 445 460 - -
Lele19g0327 502 Coils Coil 270 304 - -
Lele19g0327 502 MobiDBLite consensus disorder prediction 128 151 - -
Lele19g0327 502 MobiDBLite consensus disorder prediction 438 460 - -
Lele19g0327 502 PANTHER PROTEIN DYAD 62 496 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0327 Lele-ChrLele19 1938374 1941396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0327 149 230 PHD Transcription Factor Family AT5G22260 40.964 4.47e-07 50.8