Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0326 ATGGGCAGATCTCCTTGCTGCGAGAAAGAGCACACCAACAAAGGCGCCTGGACCAAAGAGGAAGACCAACGCCTCATCAGCTACATCAAGCTTCATGGCGAAGGTTGCTGGCGCTCCCTCCCCAAAGCCGCTGGTTTGCTCCGGTGTGGCAAGAGTTGCAGACTCAGATGGATCAACTATCTCCGGCCTGATCTCAAGCGAGGCAACTTCTCCGAAGAAGAAGACGAGCTCATCATTAACCTCCACAGCCTCCTTGGCAACAAATGGTCCCTGATCGCCGCGAGGTTACCGGGAAGAACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAGCTCTACAGCCGCGGTATTGACCCTCAGACGCATCGGCCCCTCAACGCCGCTACCGCTGCCGCTGCTACCACTACCGATACCGTTTCCACCACCACAGATGCCGTTGCTGTTGTCAGCAGCTGCAGCAACAACGATAATGCCACCAAGTTTCAGTTAGTGACTGAGTTGGGTGGCGCCAACAACAATAACAATAATGCGAAGAATATCGTAAAAACCGAATCGGCCTGCGAAGACTCGAACAGCAGCAGTGGGGTTACCACAGAAGAATCCACCACCTATACGCATGCTCAGCTCAACTTGGAGCTCTCCATAGGCCTTCCCTCTGATCAGACTTCTTCCGTAAACCAAGACAAGTTTATTAAAGGACAACAACCTCGGCCAGAACAACGACAACAAATCTTGTACCATTGGTATGGCAACTTTAGTAGTTCTGGTCAAGGTGTGTGTTTGTGTTACGGTCTAGGGTTTCAGAGTAAGGATCAAGCATGCAGCTGCAAATTAGCCATGGGTGCTTCTGTTGTTGTTCCTGCTACTACCCCTCCCACTGTTACTGAAACTGCCACCGATAATATGTATAGATTTCACACGCCCATGAACATTTAG 948 0.5063 MGRSPCCEKEHTNKGAWTKEEDQRLISYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAATAAAATTTDTVSTTTDAVAVVSSCSNNDNATKFQLVTELGGANNNNNNAKNIVKTESACEDSNSSSGVTTEESTTYTHAQLNLELSIGLPSDQTSSVNQDKFIKGQQPRPEQRQQILYHWYGNFSSSGQGVCLCYGLGFQSKDQACSCKLAMGASVVVPATTPPTVTETATDNMYRFHTPMNI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0326 315 FunFam Myb transcription factor 68 137 - -
Lele19g0326 315 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele19g0326 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele19g0326 315 FunFam MYB-related transcription factor 13 66 - -
Lele19g0326 315 Gene3D - 68 139 - -
Lele19g0326 315 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 219 - -
Lele19g0326 315 SMART sant 66 114 IPR001005 -
Lele19g0326 315 SMART sant 13 63 IPR001005 -
Lele19g0326 315 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele19g0326 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele19g0326 315 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele19g0326 315 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele19g0326 315 CDD SANT 16 61 IPR001005 -
Lele19g0326 315 Gene3D - 14 66 - -
Lele19g0326 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele19g0326 315 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0326 Lele-ChrLele19 1930710 1931820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0326 1 223 MYB Transcription Factor Family AT4G09460 58.369 1.18e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele19g0326 Myb_DNA-binding 6.4e-15 CL0123