Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0323 ATGTATAAGTACGAGGAGGTGAAGGATTTGGGAGCGGGCAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCACGAAATATATCGAGCGTGGTCGCAAGATTGATGAGAACGTGGCCAGAGAGATTATGAACCATAGGTCCCTTCGACACCCCAATATAATTCGATTCAAGGAGGCAAGCATTTTAGTCATTTTGACTCCCACACATTTAGCAATAGTAATGGAGTATGCTGCTGGAGGGGAATTATTTGAGAGGATATGCAATGCTGGTAGATTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGCGTTAATTTCTGTCACACCATGCAAATATGCCACAGAGATTTGAAGCTTGAAAATACCCTTTTGGATGGAAGTCCTGCACCTCGCTTGAAAATATGCGATTTCGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAGTCTACGGTTGGAACTCCAGCTTATATCGCACCTGAAGTTCTTTCGAGGCGCGAATATGATGGCAAGTTAGCTGATGTGTGGTCATGTGGGGTGACTCTTTATGTCATGCTTGTTGGAGCATATCCCTTTGAGGACCAAGATGACCCAAGGAATTTCCGTAAAACAATCCAGCGAATAATGGCTGTTCAATACACAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGGGGCTAATCCATTGAGGAGAATAACAATAAAGGAAATCAAGATCCACCCATGGTTTCTGAAGAACCTACCAAGGGAATTAACTGAATCAGCGCAGGCGGTGTATTATCAGAGAGACAATCCAAACTTTCAGGGTCAGAGTGCGGAGGAAATAATGAGGATTATTGGAGAGGCAAGAACCCCGCCACCAGTATCGAGGCCGGTCAAAGGTTTTGGGTGGGAAGGGGAAGAAGAGGAAGAAGGAGGAGGAGCAGAAGAAGAGGCAAAGGCAGAGGAGGAGGAGGAGGAGAAAGATGAAGAAGAAGAAGAGTATGACAAAAGGGTGAAGGAGGTTCATGCAAGCGGAGAATTTCAAGTCAGTTGA 1098 0.4545 MYKYEEVKDLGAGNFGVARLMRNKETKELVATKYIERGRKIDENVAREIMNHRSLRHPNIIRFKEASILVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYTIPDYVHISQDCRHLLSRIFGANPLRRITIKEIKIHPWFLKNLPRELTESAQAVYYQRDNPNFQGQSAEEIMRIIGEARTPPPVSRPVKGFGWEGEEEEEGGGAEEEAKAEEEEEEKDEEEEEYDKRVKEVHASGEFQVS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0323 365 MobiDBLite consensus disorder prediction 308 365 - -
Lele19g0323 365 ProSiteProfiles Protein kinase domain profile. 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0323 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lele19g0323 365 MobiDBLite consensus disorder prediction 322 346 - -
Lele19g0323 365 PANTHER SERINE/THREONINE KINASE 3 324 - -
Lele19g0323 365 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lele19g0323 365 CDD STKc_SnRK2 3 263 - -
Lele19g0323 365 SMART serkin_6 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0323 365 Coils Coil 328 355 - -
Lele19g0323 365 Pfam Protein kinase domain 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0323 365 FunFam Serine/threonine-protein kinase SRK2E 1 83 - -
Lele19g0323 365 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Lele19g0323 365 FunFam Serine/threonine-protein kinase SRK2A 84 272 - -
Lele19g0323 365 SUPERFAMILY Protein kinase-like (PK-like) 3 300 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0323 Lele-ChrLele19 1913366 1915721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0323 3 286 CBL-interacting serine-threonine protein kinases AT4G24400 40.940 1.13e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele19g0323 Pkinase 7.4e-67 CL0016