Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0310 ATGGGAGATGGCAATAGTACCACCGGCCGGTCCAACAACAATAACAGTAATAAGCCTGAGTGGCTACAACAGTACGATCTTATTGGGAAAATTGGGGAAGGTACCTATGGTCTTGTATTCCTCGCAAGGATCAAGTCTGCAACGAATCGTGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCTAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATCATGTTACTCAGGGAGATAACGCACGAAAATGTTGTGAAGCTTGTGAATGTTCACATCAATCAATCGGATATGTCTCTGTACCTAGCTTTTGATTATGCTGAACATGACCTTTATGAAATAATTCGGCATCACAGGGACAAAGTCAACCATTCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGTTGCTCAATGGACTTAATTATCTGCATAGTAATTGGATAATTCATCGAGACCTTAAGCCATCGAATATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCATTAAAGTCATTATCTGAAAATGGAGTTGTTGTTACCATATGGTATCGTGCACCTGAGTTGCTTCTTGGGGCTAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCCGAGCTGTTAACATTGAAGCCACTATTTCAAGGAGCAGAAGTCAAAGCCACACCTAATCCATTTCAGCTTGATCAACTTGATAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTACGCTAGCATTCCTTCCCCACTGGCAACAAGATCTTCAGCATATACAAGGGCACAAATATGACAACACTAGCCTTTGTAATGTTGTACACCTACCTCCAAAAAGTTCTGCTTATGATCTCCTATCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACGGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTACCTGGGCGGAATGCTCTTGTACCCTGCCAACCTGGAGAGAAAATTGTGAATTACCCTACTCGTCCAGTTGACTCAACAGTAGATTTTGAAGGGACAACCAATTTGCAACCTTCTCAACCGGTTTCATCTGGAAATGCTGTTTCTGGCAACATGACAGGTGGTCATGTATCAAATAGATCTGTCCCTCGGCCAATGAATGTTGCTGGCATGCAAAGGATGCCACATATGCAAGCTTATAATCTTGCATCCCAGGCAAGGATGGGTGGTGGAATGAATTCTAACCTCCCTATGCCTCGAGGTGTTGCCCAGGCTCATCATCAGCAGCAGTTGAGAAGGAAAGACGGTGGAATGATGTTGCCTGGATACCCTCCACAGCAAAAATCAAGGCGTAACTAA 1416 0.4287 MGDGNSTTGRSNNNNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINQSDMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKSLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPTLAFLPHWQQDLQHIQGHKYDNTSLCNVVHLPPKSSAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPTRPVDSTVDFEGTTNLQPSQPVSSGNAVSGNMTGGHVSNRSVPRPMNVAGMQRMPHMQAYNLASQARMGGGMNSNLPMPRGVAQAHHQQQLRRKDGGMMLPGYPPQQKSRRN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0310 471 ProSiteProfiles Protein kinase domain profile. 25 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0310 471 FunFam Cyclin-dependent kinase e-1 13 108 - -
Lele19g0310 471 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Lele19g0310 471 Pfam Protein kinase domain 25 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0310 471 CDD STKc_CDK8_like 24 335 - -
Lele19g0310 471 SMART serkin_6 25 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0310 471 PANTHER CELL DIVISION PROTEIN KINASE 23 341 - -
Lele19g0310 471 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Lele19g0310 471 SUPERFAMILY Protein kinase-like (PK-like) 20 337 IPR011009 -
Lele19g0310 471 FunFam Putative cyclin-dependent kinase E-1 109 348 - -
Lele19g0310 471 MobiDBLite consensus disorder prediction 429 471 - -
Lele19g0310 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lele19g0310 471 Gene3D Transferase(Phosphotransferase) domain 1 108 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0310 Lele-ChrLele19 1846295 1851795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0310 1 470 Core Cell Cycle Gene Families AT5G63610 76.050 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Lele19g0310 Pkinase 1.5e-68 CL0016