Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0307 ATGAAGGGTGAATTAGAGTTACCGCCAGGATTCAGATTTCACCCGACGGATGAGGAGTTGGTGAAGTACTATCTCTGCAGGAAATGTGCTTCGCAGTCTATTGCTGTTCCTATTATCAAAGAGATTGATTTGTACAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATACGGAGAGAAAGAATGGTACTTCTTCTCACCAAGGGACAGAAAATATCCAAACGGATCAAGACCCAACAGGGCCGCGGGAAGCGGGTACTGGAAGGCGACCGGAGCTGACAAGGCCATCGGAAAGCCTAAACCTCTCGGAATCAAGAAGGCACTCGTTTTCTACGCCGGTAGAGCCCCCAAAGGCATAAAAACCAATTGGATCATGCACGAATATCGCCTCGCTAATGTTGATCGCTCTGCTCGCAAGAACAACAACTTGAGGCTTGATGATTGGGTATTGTGCCGGATTTACAACAAGAAAGGTGTGATTGAGAAATACAACACCCAGGATCAGAAATCGAGCAAGTTTTTCTCAGATGTCGATGAGCACGAAACTAAACCAGTAATCAACATGCTCGCCAATGACCAATTGTACATGGACACGTCGGAATCGGTGCCGCGGTTGCACCCGGACTCTAGCTGCTCCGAGCACGTGCTGTCACCGGACATCACGTACTGCGACAAGGAGGTGCAGAGTGAGTCCAAGTGGAATGAGATGGCTCTGGGATTGAAAGACGACGCCTTCGATTTCGAGTTCAATTACGTGAACAATATGAATGGTAACAACACGGGATATGACGCTTTTGCCCCTCAGGTCCAGTACCAAATGAACCAGCTCTCACCCTTACAGGACATGTTCATGTATCTCCAGAAACCATTTGAAACACAAATTTATCAAGAGGGAAGATTGGACCCCACATATTATTAA 921 0.4712 MKGELELPPGFRFHPTDEELVKYYLCRKCASQSIAVPIIKEIDLYKFDPWQLPEMTQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGRAPKGIKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGVIEKYNTQDQKSSKFFSDVDEHETKPVINMLANDQLYMDTSESVPRLHPDSSCSEHVLSPDITYCDKEVQSESKWNEMALGLKDDAFDFEFNYVNNMNGNNTGYDAFAPQVQYQMNQLSPLQDMFMYLQKPFETQIYQEGRLDPTYY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0307 306 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Lele19g0307 306 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lele19g0307 306 FunFam NAC transcription factor 16 161 - -
Lele19g0307 306 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Lele19g0307 306 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lele19g0307 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0307 Lele-ChrLele19 1834377 1835670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0307 1 291 NAC Transcription Factor Family AT1G01720 62.252 1.11e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele19g0307 NAM 5.3e-39 No_clan