Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0289 ATGAAAACCACTTATTCAATGATGAAACAAGGTTGTGAGGTTGAAGCAATAGGCATTCACTACAAGATTCGCACACAGAAAAGCGAGCACTACTCTCTGAAACTTTTTAGGAAAACTCCACAACTGAATGAGGAAGAAGATGTTCAAACTCAAAAACCAGAAGAGGAAGCAAAAAAAGAAGCACAGAAGACATGCAATGGAGTGAGGCATGTACTCAACGACGTGAACCTGGAAGGCAAGCCGCGGGAAATTCTGGCCATAGTTGGGCCAAGTGGTGCTGGAAAATCATCCCTGCTTGAGATTCTTGCCGGTAAGCTCACTCCACAAAGTGGTTGTGTCTTGGTGAACCAGAAACCTGCAGATAAAGCTCAGTTCAGCAAGATTTCAGGTTATGTTACTCAAAACGATACTCTGTTTCCCTTACTTACGGTTGAAGAAACTCTAATGTTCAGTGCGAAGCTGAGGCTAAAGCTTTCTCAACAACAACTCTGCTCCAAGGTCAAGTCACTGATTCACGAACTAGGACTTAACCATGTTTCTGGGACTCGGATTGGAGACGAAAGAGACCGTGGGATATCTGGTGGCGAGAGGCGGCGAGTTTCTATAGGTGTTGAAGTCATACACGATCCAAAGGTTCTGATTCTGGATGAACCCACTTCTGGGCTTGATAGTACTTCTGCACTGCAAATCATTGATATGCTTAAGGTCATGGCTGATTCAAGGGGAAGAACCATCATCCTTAGCATCCATCAGCCTGGGTTCAGAATAGTGAAGTTATTTAATTCTATATTGTTGTTAGCCAATGGCTGTGGGTTACACCACGGTAATGTGGAGTTGCTGAGTGCGAATATGAGATTAATGGGTCTAGATCCTCCTCTTCACGTTAATGTAGCTGAATTTGCCATTGAATCCTTAGAAACCATTCAGCAACAACAAAAATGCAAACAAGTTCAGCATGAAACGCCCTCGCATTTGCCAGTAACCGGGCAACAAAAGAAATTTGAAGATGAAGTTAAAAGTGGTAGGTTTACCCTGCAACAGCTTTTTCAACAATCAAGTGGAATTGAATTCACGTGTGATTATGCAAATTCTAGAATGAGAGAAACTTTGATTCTCACTCACAGATTCTCCAAGAATATCTTTCGTACAAAGGAGCTCTTTGCATTTAGAACAATTCAGATGCTCATATCCGGGCTCATTCTGGGATCCATCTTTTGTAATCTTAAGGATGATCTAGTGGGAGCTGCAGAAACGGTAGGTCTATTTGCTTTCATACTGACATTTTTGTTAACAAGCACAATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACCTCATGTGGTAGCTACAGAGTTTCATCTTATGCTATTGCCAATGGTCTTGTTTACTTGCCATTTCTACTAATCCTAGCAATTATATTCACCGTACCCTTATACTGGCTTGTGGGGCTGAACAGGAATTTCACGGCATTTTTGTACTTCTTGTTGCTAATTTGGTTAATTTTTATACGGCGAATTCAGTTGCGGTATGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTGA 1593 0.4156 MKTTYSMMKQGCEVEAIGIHYKIRTQKSEHYSLKLFRKTPQLNEEEDVQTQKPEEEAKKEAQKTCNGVRHVLNDVNLEGKPREILAIVGPSGAGKSSLLEILAGKLTPQSGCVLVNQKPADKAQFSKISGYVTQNDTLFPLLTVEETLMFSAKLRLKLSQQQLCSKVKSLIHELGLNHVSGTRIGDERDRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADSRGRTIILSIHQPGFRIVKLFNSILLLANGCGLHHGNVELLSANMRLMGLDPPLHVNVAEFAIESLETIQQQQKCKQVQHETPSHLPVTGQQKKFEDEVKSGRFTLQQLFQQSSGIEFTCDYANSRMRETLILTHRFSKNIFRTKELFAFRTIQMLISGLILGSIFCNLKDDLVGAAETVGLFAFILTFLLTSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAIIFTVPLYWLVGLNRNFTAFLYFLLLIWLIFIRRIQLRYVSVLWCLILLLGTQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0289 530 FunFam ABC transporter G family member 5 57 317 - -
Lele19g0289 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 286 IPR027417 -
Lele19g0289 530 SMART AAA_5 81 299 IPR003593 -
Lele19g0289 530 MobiDBLite consensus disorder prediction 42 62 - -
Lele19g0289 530 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Lele19g0289 530 Pfam ABC-2 type transporter 369 508 IPR013525 GO:0016020|GO:0140359
Lele19g0289 530 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 293 IPR003439 GO:0005524
Lele19g0289 530 Pfam ABC transporter 72 220 IPR003439 GO:0005524
Lele19g0289 530 Gene3D - 55 325 IPR027417 -
Lele19g0289 530 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0289 Lele-ChrLele19 1725284 1726876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0289 70 251 Calmodulin-binding Proteins AT2G36910 27.807 2.89e-12 67.8