Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0283 ATGTCGCTTTCACAAAGGCAAAAAGATCACTTGGGAATTATAATGTCCAGAAGCAGTGGCAATGAAAGTAAGAGTTGTAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGACTGAAACAGCTTGTGGAGCAGTACGGTCCCCAGAACTGGAATTTCATTGCAGAACATCTTGATGGCAGATCAGGCAAAAGTTGCAGATTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAATTCAATTCACAGAGGAGGAAGAAGAAATACTTCTAGCTCTTCACAAGGTAAAGGGAAACAAGTGGGCTGCAATTTCAAGGTTCTTGCCTGGAAGAACTGATAATGCTGTCAAGAATCACTTCCATGTCCTCATGGCAAGAAGAAAGAGAGAACGTTACTCACTTTTTGGTGACAGAAGCAGTAATCATAGTCATAATCATATTCCTATGCATAGGCCTACCTCAGGGATAATTAATAACTTCACCTTCCAAAACAACAGAAACTTCTTGGGACTGAATCCTTGGAATACTCGAAGGGATACTTCTTCGACCGTCTCATCGGAGTTACTGAGTTTTGAAGCATCTGGTGGTGCTTCTTGTTCGCTTGGCAGTTACAGTAGTTTTACTGCCCCAGGAATTCCTAGTATTGGTAAGGTGGTTCCTCTTCTTCCCCAGAGGTTCTCAAAATCCTATTTTGCCCAAAGAACTGAGGATTATTCTTCCATGAAAGGCATGACAGACAAGATTACTCTGGAAGAACAAGTTGAAGAGCTTAAGGATGTTTCCTTTATAGACTTTCTTGGAGTGGGAAGTTGTTCTGCGAGCGACAACAGAGTCATCATCACTTCATTTTGCGAGACAGAGGGAATACTCAGATGTGGTTATAGAAGTTTAAGGGAGACCATGGCTGTAATTGAATCAATTGCCAATATTCCTTTGCAAGACCCACTTAAGGAGGAATTCTGTTCTGATGACTTGACTTGGACCAAGTTTGGCAACGCTGAGCACCATGATGATGTTGCCCTTATTCCTTACGAACGAGTTGATTCTTTTATGATTGGTGAGTGCTCAAATGTAGAATGCCCGACGCAATTTCATATTGAGAGAGCAAGAAGACGGTCATTGGGCAGCTTGAAGGAGTATAAGGATGATGAGTATCTGGAGTACAGGCTGTACTGGTGCTCCTTTGGTCCAGAAAATTACGGGGAAGGTGGAGGTATATTACCTAGCAGAAGATATCGGCTGAATACTCGAAATCGTGCTGCTAGACCTCAATCAATGCGGGGTTGTACCTGTCACTTTGTTGTCAAACGTCTTTATGCCCGTCCATCACTTGCACTTATCATATACAATGAGAGGCGCCATGTTAACAAGTCAGGTTTTGTCTGCCATGGGCCACTTGACAGAGATGCTATTGGACCAGGTGCCATAAAAGTCCCATATATATGTAATGAGATTCAGCAGCAAACAATGTCCATGATTTATCTGGGCATTCCTGAAGAAAATATCCTGGAGAAACACATTGAAGGAATTCAACGTTATTGTGGTTCTAATGCAAAAGTCAATAACCTTGCCTCTCAGTATGTCCACAAACTAGGGATGATTGTTAAAAGGTCCACCCATGAGCTGGACCTTGATGATCAGGCCAGCATTCGCATGTGGATTGAACGAAATAAGAAGTCTATATTTTTTAACCAGGACACTTCAGGGTCAGACCCTTTTATCTTGGGAATCCAAACAGAATGGCAGTTGCAGCAAATGATCCGGTTTGGTCACCGTAGTATTGTTGCAGCTGACTCAACCTTTGGCATTAAAAGACTTAAATATCCTCTGTTCACACTACTTGTTTTTGATTCAAGACATCATGCACTTCCTGTTGCATGGGTCATTACACGAAGCTTTGCAAGGCCTGATGTGTCAAAGTGGCTGAAAGCTTTAATTGCTCGAGCTCGAAGTGTTGAACCTGGCTGGAAAGTCAGTGGACTTTTAGTTGATGATGCAGCTGCTGATATAGATCTTTTGAGAGATATATTTTGCTGTCCGATCCTATTTTCACTTTGGCGCGTTCGGAGATCGTGGCTAAGAAATATTGTCAAGAAATGCAGTAGCATTGACGTCCAACGAGAGATTTTCAAACGTCTCGGGACTATAGTATACGGCATATGGGGTGGAGATAATACATCTGTCGCCTTGGAACAAGTTGTCATGGATTTTGTTGATCAAACTACTTTCATGGAATATTTCAAAGCCTCCTGGGTGCCTAAGATTGAAATGTGGCTTTCAATGATGAGAACTCTTCCACTAGCAAGTCAAGAAGCATCTGGTGCCATAGAAGCTTATCATGTGAAACTGAAGGCCAAACTTTTTGATGATTCACATCTTGGAGCACTTCAAAGAGTCGATTGGTTGGTGCACAAGTTAACAACGGAACTCCATTCAAGCTACTGGCTCGACCGATACGCTGATGAAAGTGATTCTTTCCTGAATGTAAAGGAGGAATATATTGCTTCCACATCATGGCACCGAGCACTACAAATTCCTGACTCAGCCGTTACCTTAGATGATGACAAGGACGGCCTCTATATGAGAGTTGTGGGTCAGAAAGACAGCACTACAAGACATTTGGTGTGGAATCCTGGATCAGAATTTGCATTTTGTGATTGCTCTTGGTCACTGCAAGCTAACCTTTGCAAGCATGTAATCAAGGTGAACATGATGTGTGAAAATAGTGAGGGCTCTCAACCATCTTTGTCTTTTCTATCATTTAAAGAGGTTTTGATGGATCTGTGGACAAAACCAAAGGATGATTCAGTTGCATTGGACCTGTCAATGGTTTGGACCCACCAGATGCTGGATCAAATCCAAAAACTTGTTGAACTGAATAACTCTAATGATATTGGTGCGGTAGTGAAAAATATGCCTTTGAAATGGGTATCAAAGAAAGTTATAACCTATCAAGGCAAACGATCATTACCTTTGGCTCTTCCTTCTGGTAGCAATATTGCAAAAATTGGTGCTAATCGTAGGAAGAGTCGAAAACGGAAAAGATTGTCAGGAATAAGATGA 3066 0.4204 MSLSQRQKDHLGIIMSRSSGNESKSCNRGHWRPAEDERLKQLVEQYGPQNWNFIAEHLDGRSGKSCRLRWYNQLDPNIVKIQFTEEEEEILLALHKVKGNKWAAISRFLPGRTDNAVKNHFHVLMARRKRERYSLFGDRSSNHSHNHIPMHRPTSGIINNFTFQNNRNFLGLNPWNTRRDTSSTVSSELLSFEASGGASCSLGSYSSFTAPGIPSIGKVVPLLPQRFSKSYFAQRTEDYSSMKGMTDKITLEEQVEELKDVSFIDFLGVGSCSASDNRVIITSFCETEGILRCGYRSLRETMAVIESIANIPLQDPLKEEFCSDDLTWTKFGNAEHHDDVALIPYERVDSFMIGECSNVECPTQFHIERARRRSLGSLKEYKDDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNTRNRAARPQSMRGCTCHFVVKRLYARPSLALIIYNERRHVNKSGFVCHGPLDRDAIGPGAIKVPYICNEIQQQTMSMIYLGIPEENILEKHIEGIQRYCGSNAKVNNLASQYVHKLGMIVKRSTHELDLDDQASIRMWIERNKKSIFFNQDTSGSDPFILGIQTEWQLQQMIRFGHRSIVAADSTFGIKRLKYPLFTLLVFDSRHHALPVAWVITRSFARPDVSKWLKALIARARSVEPGWKVSGLLVDDAAADIDLLRDIFCCPILFSLWRVRRSWLRNIVKKCSSIDVQREIFKRLGTIVYGIWGGDNTSVALEQVVMDFVDQTTFMEYFKASWVPKIEMWLSMMRTLPLASQEASGAIEAYHVKLKAKLFDDSHLGALQRVDWLVHKLTTELHSSYWLDRYADESDSFLNVKEEYIASTSWHRALQIPDSAVTLDDDKDGLYMRVVGQKDSTTRHLVWNPGSEFAFCDCSWSLQANLCKHVIKVNMMCENSEGSQPSLSFLSFKEVLMDLWTKPKDDSVALDLSMVWTHQMLDQIQKLVELNNSNDIGAVVKNMPLKWVSKKVITYQGKRSLPLALPSGSNIAKIGANRRKSRKRKRLSGIR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0283 1021 PANTHER ZINC ION BINDING PROTEIN 302 1014 - -
Lele19g0283 1021 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Lele19g0283 1021 Pfam Myb-like DNA-binding domain 82 124 IPR001005 -
Lele19g0283 1021 SMART sant 79 127 IPR001005 -
Lele19g0283 1021 SMART sant 27 76 IPR001005 -
Lele19g0283 1021 SUPERFAMILY Homeodomain-like 27 121 IPR009057 -
Lele19g0283 1021 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 129 IPR017930 -
Lele19g0283 1021 CDD SANT 90 125 IPR001005 -
Lele19g0283 1021 ProSiteProfiles Zinc finger SWIM-type profile. 871 908 IPR007527 GO:0008270
Lele19g0283 1021 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 78 IPR017930 -
Lele19g0283 1021 CDD SANT 31 72 IPR001005 -
Lele19g0283 1021 Gene3D - 82 148 - -
Lele19g0283 1021 FunFam MYB transcription factor 28 79 - -
Lele19g0283 1021 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lele19g0283 1021 Gene3D - 28 79 - -
Lele19g0283 1021 ProSiteProfiles Myb-like domain profile. 23 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0283 Lele-ChrLele19 1679481 1687175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0283 15 273 MYB Transcription Factor Family AT4G33450 47.101 8.79e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele19g0283 Myb_DNA-binding 3.6e-15 CL0123