Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0278 ATGCCCGCTTGGTGGGGAAGAAAGTCCGGCAAGAACAAGGAGGAGCAGCGCCATCAGCAGCTTCCCCAGCCTGAATCACATGGCGGAATTCAGTTTAATTTCATCAAATCGCCGATCAGGAATGGTGCCAAGAAAGGAAGAGACAAACCTAAGAGCTTTGACGAGGTCTCAACCGCGATGCTTTCTCGGAGTTCACCCAGAACCAGCAGGGATTTAACTCCTACTGGTGCTGCTCCCGTTGGTGGATCGTCCTTGGGATTTTCTTGTTTCGATTCTGATGGCGGCGGCGAAAAGATAGGCCTCCCCTTGCCTCGACCATCGATTTCGTCCCCACAGAGCTTTGGGAACGATCAAGGAGATGGAGATGGCTTGGGATCTGCGTCGATCTCTGGTTCAAGCGTGAGTTCTTCTGGGTCCTGCGATCACCATCCAATCTCTCAATTTGATGGCATCAGGGGACGAGGTGATATGAAGATTAATATGAGGTCAAAAAGCCCAGGTCCTGGGTCTAGAGGGCCCACCAGCCCGACTTCACCCCTCCATCCAAGATTGCATGCTCTAAGTATTGACTCTCCTACAGGCAAACAAGATGATGGAAGGAGTGAATGTCATCCATTGCCCCTACCACCAGGTTCACCGACTAGCCCTTCTGCTCTCTCCAATGCAAGAACAAATGGGCTTCTAGAAAACACTATCAACAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGAGGGACATTTGGTCATGTTTACCTGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTCTCTGATGACCAAACATCGAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATCTGCTCAGTTCACTTTCACATCCTAACATTGTTGAGTACCATGGGAGTGAACTGGGAGAAGACACACTTTCTGTTTATTTAGAATATGTCTCTGGTGGTTCGATCCATAAACTACTTCAGGAATATGGTCCATTTAAGGAACCTGTCATTCAGAATTATGTTAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAACACAGTGCACAGGGATATCAAAGGGGCAAACATACTAGTTGATCCTAATGGCGAGATTAAGTTGGCGGACTTTGGAATGGCTAAACATATAAATTCGTCCACCTCCATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTTATGAATACAAATGGCTACAATCTTGCTGTGGATATATGGAGCTTAGGATGCACAATTCTGGAAATGGCGACATCAAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAGAGATATGCCTGAAATCCCGGAGCATCTTTCAAATGATGCCAAGTCTTTCATACAACAATGCTTACAAAGAGATCCATCAGCTCGCCCAACTGCCCAAAGGTTGCTAGAGCATCCCTTTATTCGTGATCAATCTGCCACCAGAGCTGACATTAGGGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACGCCGCCACATGTGGAGCTTCATTCCAGTAGAACAAATATGACGTCAGTGGATGGAGATTATGGAACAAAGCCAACTTTTGCAGCTTCACGAGCATTAAGGAGCCCAAGAGATAACGCAAGAATGATTACATCTTTACCGGTATCTCCCTGCTCAAGTCCATTGCGGCAACATGGATCAGCATACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTACAACCCGGTGGCACAAAGTTCCTACAATTTTAGCGATCTCTCTTCATATCCAGTGAGATCAAACGCCACCTTCACTTTGGATCCTTGGAATGAGAGATCTCCATATAACGCCCACACACCACCAGGTGGGTCCCCAAGAAGAAGACTTATTTGA 1923 0.4623 MPAWWGRKSGKNKEEQRHQQLPQPESHGGIQFNFIKSPIRNGAKKGRDKPKSFDEVSTAMLSRSSPRTSRDLTPTGAAPVGGSSLGFSCFDSDGGGEKIGLPLPRPSISSPQSFGNDQGDGDGLGSASISGSSVSSSGSCDHHPISQFDGIRGRGDMKINMRSKSPGPGSRGPTSPTSPLHPRLHALSIDSPTGKQDDGRSECHPLPLPPGSPTSPSALSNARTNGLLENTINNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDQTSKECLKQLNQEINLLSSLSHPNIVEYHGSELGEDTLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYNLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSRDMPEIPEHLSNDAKSFIQQCLQRDPSARPTAQRLLEHPFIRDQSATRADIRDAFPYMFDGSRTPPHVELHSSRTNMTSVDGDYGTKPTFAASRALRSPRDNARMITSLPVSPCSSPLRQHGSAYKSCMLSPPHPTYNPVAQSSYNFSDLSSYPVRSNATFTLDPWNERSPYNAHTPPGGSPRRRLI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0278 640 MobiDBLite consensus disorder prediction 617 640 - -
Lele19g0278 640 MobiDBLite consensus disorder prediction 106 143 - -
Lele19g0278 640 SUPERFAMILY Protein kinase-like (PK-like) 235 580 IPR011009 -
Lele19g0278 640 Pfam Protein kinase domain 239 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0278 640 ProSiteProfiles Protein kinase domain profile. 238 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0278 640 CDD STKc_MEKK1_plant 237 494 - -
Lele19g0278 640 MobiDBLite consensus disorder prediction 1 222 - -
Lele19g0278 640 FunFam Mitogen-activated protein kinase kinase kinase 236 513 - -
Lele19g0278 640 Gene3D Transferase(Phosphotransferase) domain 1 235 514 - -
Lele19g0278 640 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 76 500 - -
Lele19g0278 640 MobiDBLite consensus disorder prediction 519 538 - -
Lele19g0278 640 MobiDBLite consensus disorder prediction 521 536 - -
Lele19g0278 640 SMART serkin_6 238 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0278 640 ProSitePatterns Protein kinases ATP-binding region signature. 244 267 IPR017441 GO:0005524
Lele19g0278 640 MobiDBLite consensus disorder prediction 57 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0278 Lele-ChrLele19 1660929 1665777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0278 1 553 MAP Kinase Kinase Kinase AT1G53570 56.537 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele19g0278 Pkinase 2.5e-74 CL0016