Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0269 ATGGATATCAACCAAAACCCTACCATGTTCACAAGCCTTAACCACACCACTTGGAATCTGGACAATAATATGGGAATAGATCACAGCAATATCCACCATCATCATCATCAAATCCCCATGTGTTCTTCTTGGCCTAACTACCCTAATTACCCTCATCAGATAATACCATCTTCTTCGGCGTCCACCACAATTATACCCTCTTCAGGGTTTCTAAACAACGTCGTGTTGGAAGAAGAAGACGAAGAAAGAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGCTGGGAGCAGTGAAGGAGATGCTGTACAAGATCGCTGCTATGCAGCCGGTGGACATAGACCCAGCCACCATCCGAAAGCCAAAGAGGAGAAACGTCAGAATCAGCGACGATCCACAAAGCGTAGCCGCTAGACACCGGAGAGAGAGGATCAGCGAGAAAATCCGAATCCTACAAAGACTCGTCCCCGGTGGCACCAAGATGGACACTGCCTCCATGCTCGACGAAGCCATTCTCTATGTCAAGTTCTTGAAGCGACAAATCAGGTTGCTCCAATCTCAACCCTCACCCTCACAACCACCACAATGCATCACTAACACTACTACTCTTTCCAATATTGGGCTTAACAATACCGATCATTGGCCTTTTGCACCACCGTCTCTACTACACTGTCCCATCACCAACTCCTCCTCCGCCACCGTCACCACCATGGGCATGCCGGTCAGGCTGGGACTTGACTCTGGCTATAATCACGAGTCGTGA 774 0.4897 MDINQNPTMFTSLNHTTWNLDNNMGIDHSNIHHHHHQIPMCSSWPNYPNYPHQIIPSSSASTTIIPSSGFLNNVVLEEEDEERGEEEEEEEEEEEEEELGAVKEMLYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLLQSQPSPSQPPQCITNTTTLSNIGLNNTDHWPFAPPSLLHCPITNSSSATVTTMGMPVRLGLDSGYNHES 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0269 257 Gene3D - 135 196 IPR036638 GO:0046983
Lele19g0269 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Lele19g0269 257 Coils Coil 74 105 - -
Lele19g0269 257 SMART finulus 138 187 IPR011598 GO:0046983
Lele19g0269 257 Pfam Helix-loop-helix DNA-binding domain 142 181 IPR011598 GO:0046983
Lele19g0269 257 MobiDBLite consensus disorder prediction 78 97 - -
Lele19g0269 257 FunFam BHLH transcription factor 135 197 - -
Lele19g0269 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 194 IPR036638 GO:0046983
Lele19g0269 257 MobiDBLite consensus disorder prediction 77 97 - -
Lele19g0269 257 CDD bHLH_AtIND_like 133 188 - -
Lele19g0269 257 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 30 220 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0269 Lele-ChrLele19 1604652 1605425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0269 99 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 85.000 5.65e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele19g0269 HLH 7.8e-06 No_clan