Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0266 ATGATGGCCGACTCTGCTTTTTGTGTCATCTTCCTTCTCATCTCCGTCGTCTCCTCCGAGGCCGGTGCCTCCCCATCTATCCAACGCGCCTGCCTAGCCACCCGCTTCCCCAAAGAATGCCTTTCTTCTCTGACCGGACCCGTTAGCGACCTCCCTCCCAACCCCACCTCGCTTCAAATCATCCTATCCGCCATCGGCGTATCCGCCGACAACCTCAAGACCGCTCAATCTAAGATCAAGTCCCTCATCGACTCCTCGCGCGATGGTGCCTATCTCAACCGCACCATGGCTGCCCAGAGCTGCTTCACCATCCTACACGATTCTGAGTATCGCATTTCCCTCGTCAACGACGCCCTCCCGGCCGGCAAGAACAAGGACGCGCGCGCTTGGATGAGCGCTGCATTTGCCTATCAGTTCGATTGCTGGTCCGGGTTGAAGTACGTATACGGCAACGACGCCGCCTCCATCGCAGACACGTTGGCCTTCCTGGACACCCTGAGCAAGTATTCCAGCAACGCGCTGAGCATGATGGTGTCGTACGACGTGTTTGGCAGCGACACGGCGTCGTGGAAGGCGCCGAGGACGGAGCGCAATGGCTTCTGGGAGGCACCGTCGGAAATAGATAAGGATCGGTTCGGGTCCAAGGGAGGATTTCCGTTGAATTTGAAGGCGGACGTCACGGTTTGTAAGAGAAAAGAGTGTTACCAGTCGGTGCAGGAAGCCGTTGACGCCGCTCCGGATAACGGTGAGGTGAGGTTTGTGATACATATAAGAAAAGGGGTTTACGAGGAAAGTGTTAGGATTCCGCTAAGGAAGAAGAATGTGATATTTTTGGGCGATGGAATGAGGAAGACCATTATCACTGGATCTGCACATGTTGGTCAGCCCGGAATGACCACCTACAATTCCGCTACCGTCGGGGTTCTCGGGGATGGATTCATGGCGAATAATCTGACAATCCGAAACACGGCAGGACCCGATGCTCACCAAGCAGTAGCCTTCAGATCAGACAGCGACCATTCTGTTCTGGAAAACGTCGAATTAACAGGGAATCAAGACACCCTATACGCTCATTCCCTTCGTCAATTCTATAAATCATGTCGCATCCAAGGCAACATAGACATGATCTTCGGCAACGCGGCTGCGTTTTTCCAGGAATGCGCGATCCTGTTGAGCCCAAGGCAGAGCAACCCAGAAGCAGGAGAGACCAATGCAGTGACGGCGCATGGGAGAACAGACCCAGCGCAATCGACGGGCTTTGTATTTCATAAGTGCGCGGTGACTGGGACCAAGGAGTACATGGCACAGTATCGACAGAAGCCAGAGGTGCACAAGAACTTCTTGGGGAGGCCATGGAAGTTGTATTCAAGAACGGTGTTCATTCATTCTTTGTTGGAAGCTATCATCTCGCCGGAGGGTTGGATGGCATGGGACGGTGATTTGGGTCTGGACACACTTTATTATGGGGAGAGTAACAATGCTGGTGCCGGTTCCGATCGGAGTCGGAGAGTGGCCTGGAGTAGTGAAATTCCCCGCCAATATGTGACGGCGTTTTCGGTCGACAACTTCATTCAAGGCAGTGATTGGATTCCATCCGATCACCTAAGTCATCGTCCGTAG 1620 0.5364 MMADSAFCVIFLLISVVSSEAGASPSIQRACLATRFPKECLSSLTGPVSDLPPNPTSLQIILSAIGVSADNLKTAQSKIKSLIDSSRDGAYLNRTMAAQSCFTILHDSEYRISLVNDALPAGKNKDARAWMSAAFAYQFDCWSGLKYVYGNDAASIADTLAFLDTLSKYSSNALSMMVSYDVFGSDTASWKAPRTERNGFWEAPSEIDKDRFGSKGGFPLNLKADVTVCKRKECYQSVQEAVDAAPDNGEVRFVIHIRKGVYEESVRIPLRKKNVIFLGDGMRKTIITGSAHVGQPGMTTYNSATVGVLGDGFMANNLTIRNTAGPDAHQAVAFRSDSDHSVLENVELTGNQDTLYAHSLRQFYKSCRIQGNIDMIFGNAAAFFQECAILLSPRQSNPEAGETNAVTAHGRTDPAQSTGFVFHKCAVTGTKEYMAQYRQKPEVHKNFLGRPWKLYSRTVFIHSLLEAIISPEGWMAWDGDLGLDTLYYGESNNAGAGSDRSRRVAWSSEIPRQYVTAFSVDNFIQGSDWIPSDHLSHRP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0266 539 FunFam Pectinesterase 4 222 538 - -
Lele19g0266 539 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Lele19g0266 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 176 IPR035513 -
Lele19g0266 539 CDD PMEI-like_3 30 177 - -
Lele19g0266 539 Gene3D - 220 538 IPR012334 -
Lele19g0266 539 FunFam Probable pectinesterase/pectinesterase inhibitor 51 25 179 - -
Lele19g0266 539 Pfam Pectinesterase 225 526 IPR000070 GO:0030599|GO:0042545
Lele19g0266 539 PANTHER PECTINESTERASE 10 531 - -
Lele19g0266 539 Pfam Plant invertase/pectin methylesterase inhibitor 26 176 IPR006501 GO:0004857
Lele19g0266 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 179 IPR035513 -
Lele19g0266 539 SUPERFAMILY Pectin lyase-like 223 534 IPR011050 -
Lele19g0266 539 SMART PMEI_2 22 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0266 Lele-ChrLele19 1581768 1584053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0266 15 529 Carbohydrate Esterase AT5G09760 61.079 0.0 642