Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0257 ATGGAATCCACAACCAACTTCATTATCTCCAAAAACGTCAGGGTAGGAGACTATGTTTTGAAGACGAAGATCGGGGAAGGTTCCTTCTCCACAGTGTGGAGAGCCGAGCACGTATTGAGCGGCGATGAAGTGGCAGTGAAACAAGTTTGCCTTTCCAGACTTAATCGACGCCTCAAGAGCAGCTTTGATTTCGGAATCAAATTCTTATCCTCCGTCGACCACCCTAATATAATTCGCCTTCTTGACGTCTTACAGGAAGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAACTTGGCTTCTTACATTCAGCGCCATGGGAGAGTTCAACAGCAAATTGCTAGAAAATTCACGCAGCATCTTCGTTCTGCTTTAAAAATATTGCACTATCGGGGTATCATTCACAGGGACCTGAAGCCAGAGAACATTTTGTTATCAAGCCAAGGGGATGATTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCGTCCGGGTGAATATGCCGAGATCGTCTGTGGGTCTCCATTGTACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGACATGTGGAGCGTTGGTGCCATAGTTTTCGAGCTTCTAAATGGCTATCCACCCTTCAATGGAAGGAATAATGTACAGCTGTTGAAGAATATCAGAGCCTGCACATCTCTTCCATTTTCTCAGCGAGTCCTTTCAGCGTTAGACCCTGACTGTCTTGATATGTGTTCTAGACTCCTGTGCTTAAATCCAGAGGAGCGTCTATCTTTTGATGAATTTTATGGGCATAGGTTTCTAAGAAATCAAAATATGGCGGGAGAGGATGGCCATCTGAAGGCGGCGAAGACAGCTTACCGGAATGCCAAGGCCGAGGGGAATCGGCGGGAGGAGGCGCGGTGGGCCAACGTGATCGGAGATTTGTTGAAGAACAGAGGTGAATACGTTGAGGCCCTCAAATGGCTTCGTATAGATTATGATATTTCCCTCAAGTATTTGCCTGAGAAGCATTTGCTCCCAACTTGTCAGTCTCTTGGAGAGATCTACCTTCGACTTGAGCATTTCACTGATGCTCATACTTATCAGAAAAAGCATTTGGAGCTTGCCAGGGATGCTAATGACCTTGTTGAGCAGCAAAGAGCCAGCACCCAACTTGGTCGTACTTACTATGAACTATTTTCAAGATCAGAGCATGACCACAACTCAATACGAAATGCCAAAAAGTATTTTAAGTCCGCTATGGAACTGGCACAGGTTATTAAGGAGAACCCACCAACTAGTTACTCTTCCCATGTAAAGGAATATATTGATGCACACAACAATAGAGGTATGCTTGAAATGGAACTTGATAACTTGGAAGAGGCTAAGAAAATCCTAAGCCGAGGACTTAAGATTTGCGATGAAGAAGAGGTCAGCAGAGATGATGATGGGCGCAGCAGGCTGCATCATAACCTTGGAAATGTGTATATGGAACTGAGAAATTGGAATAAAGCTAGAAATAATATCGAGAGGGACATTCAGATTTGTAATCGAATTGGACATCGTCAAGGGGAAGCAAAGGGCTATATTAATCTTGGTGAAGTGAATTACAGGACTCAGAAGTATGAGGAAGCCCTTTCGTGTTACAAAAAGGCTCTGCTTCGGGCAAAGTCCCTGGAAGATGAGGATGCTTTGGTCAGGCAAATTCATCAAAATATCAAAATTATAAATGAAGCTATTAAGGTAATGGATGAATTAAAGATGGAAGAGCAGAACCTCAAAAAGCTTGAAAGAGATGTGGCCACTGCAAGAGGCACCCCACATGAGCGGAAATATCTGCTGCTGCTAAATAAATCCATCGACTGCCTCCTCGAGAAATTGGGCATAATTTTTGCGTGGGAGAAGCATTGCAAATTTGCAAAGAAGAAGAAGGAAATAGTCCGTGAACTTTGTGACAAGGAAAAGCTGGCTGATTCATATATGGCTGTGGGAGAATCATACCAGAAGCTCAGGGAATTTAATAAAGCAATTAAATGGTACACAAAAAGTTTAGAAACTTACAGAATTATTGGTAACTTAGAGGGGCAAGCACTAGTGAAGATTAATATTGGTAATGTTTTTGATTCTGCTCGCAATTGGAGAGGAGCATTAGATGCATTTCAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCATTCAGTGCAGCTTTCAGCTCTGGAGAATATGCACTATAGTAACATGATGAGATTTGATGATGAGAATGAGACCAGGCGGTTGAAAAATCTAATTGATAAGCTGAAGAAGTCAATAGAGAAACAGCCTGAAACAAAAGGCATGCCAGAGGACTACTGCTCTGAGACTGACACAGAAGCAAATTGTTATTTGTCGGATAGTGGGTCGGATGCCTTCTGCTCACCCAAGACATCATATAGATCAAAAAATACAAGTGCTGAAGAAGAGTGGAATGAAGATGCGCCTCTGAATTCTTACTTTCAGTCAATTAGAAGTTCATCTAGAAAAATAACAGGTCATATAGAAAGTCCAAGCAACTCTCTCAAACATACTGAGCAGTCACCCGAAAGCTATCCAAATCCTGCCAGTAATCATCAGACGGTTGTTGGCCGTAAACGCATCCGTATAATCCTTTCTGATGATGATGATGAGATAGAGTGTTTAAACAGAAAGGATCATCGTGGCCTATTAGAGGATGCCGCCACTTGTGATGCGACGTGTGGATGCTCTGCCTTTTTGAGTTGGCAGGTTGACATGCTGTGTGGAACCAATTGTGCAATTAATGTTGAGGATAGCAGTAGTTCTTTCAAACGCATGAGTCCTCATAGAGATAGCATAGCTGTCAGACGTTCGAGATCTTTGAGCAATGATATGATTGCTGAGCCTGATTTTGCTGGTAGTTCTAAATGCTATACGAATATTTCTGGGAAATTGTTGCAACATGATGTTACCCGTCCTGTTTTGCATGATTCTGAAAATTACCAGTATATTACATTTAAGATTGAAGATGACTTTATTCATGTGGAAGCAACTTCATGCATTGTTGATGCTCAGTTGAATATTGAGTCTTTGAAGGCCGAAGTTGCGTGCTTATACTATCTGCAACTTCCCATAGAGAAAAAATCAGAAGGTTTGTTGCCCGTTGTTCAACGCTTGAAATGTGCCGGAAGATATATAGAATCCCCGGAAACTGTCGAAAATTTCAAGGAACATCTGGGAAATGACGTCGTTGAAGCTTCTATTGTTGGATGGGTTCAAAAGCGTCTTATAAAAATGTACATGGATAGCTGCAAGGAGTTGTCTGAGGTAGCAAACATGAAGGTACTCAAGAAGCTTTACAATTTAGAGGTGTCAGATGATGAGATCATTGTGTCTGATTGTGACTTGCAAGATTTGTCGGTGACGCCGCTGTTAAATTCACTGCATTCGCACAAAACATTTGCCGTGCTTGACCTCTCTCATAATTTGTTAGGAAATGGAACGATGGAGAAACTTCAGAAGGTGTTCTCTGAATCAGGACAAACTTATGGGGGCTTGACACTAGATTTGCATTGCAACAAGTTCGGCCCTACTGCTTTATTTCAGATTTGTGAATGCCCGGCAGTATTTGCTCGACTGGAAGTGCTGAACATTTCTGGGAACCGTCTTACTGATGCATGTGGGTCTTACCTTTCAACAGTCTTAGCAAATTGCACAGTTCTCTGTAGCTTGAATGTGGAGAACTGTCATATCACAACCAGAACTATCCAAAAGATTGCTGATGCATTGGACTCTAACTCTGCACTTGCTCAGCTTTGTATAGGATACAACAATCCTGTAGCTGGAAATGCTATAGTTAATCTACTCGCCAAGCTTTCTTCAATGAAAAGGTTTTCTGAGCTGAACTTAAGTGGTTTAAAACTAGGCAATCATGTTGTTGATTCCCTGTGCAAGCTAGCTGGGAGTACAAATTTGTCAGGAATGATGCTCGGAAGCACCGGCATTGGAACTGAAGGGGCAATGCAATTAGCAGAATCATTGTCCAGAGGGACTCAAGAGCTCGTGAAACTTGACCTGTCATATTGTCAGCTCAAATCCAATTCTGTTTTAAACACCAGTTTTAATTTATTCTGTTCCATGCTAGAGCTTAATCTGGAAGGAAATCCTATTACGCCCGAGGGAAGGGATTGTCTATCTTCTCTTCTTATGAGTCCACAGTGCTGCCTAAAAGTTTTGGTCCTTAGAAAATGTCAGCTTGGGCTTGCCGGAATTCTGCGCATAACAGAGGCACTAGCAGAGAACAACTACCTGGAGGAGCTTAATCTTTCTAGTAATGCCGTTCCGAATGAACTTCACCCCTTACAACTCGACTTCTCAGCTGAAGGACCCTCGCAAATTGTAGAGACTCGTAAGGAGGATTTACCCATGATAGTGGCTGATAGTGAAGAGCCCCTTTGTGTTCTTAACACTGACTATCTTCAGCTCGAAGTTGCCGACAGTGAAGATGGTCTGGCGGCTAGAGTCGGAGGCGGTGCTTCTGGACTTGATGACAGTTGTGCTGATTCGCATCAAAGAAACTCTTCATCTCCTGATTGCAAATTCATTCAACAACTTTCAACTGCTATTGCTATGGCAAAGCACTTGCAATTGTATGACATTAGTGATAATGGTTTCCCCACTGAAGCTGCAGAAACATTCTATCGTTCTTGGTCATTAACATTACGAGCCGTTCCAAGTCAGAAGCGCATCACAGATGGTATTGTTCATTTTGAAAAGAAGGAAAATGGGTGCTGCAGAGTGAAACCATGCTGCAAGAAGTATTGA 4824 0.425 MESTTNFIISKNVRVGDYVLKTKIGEGSFSTVWRAEHVLSGDEVAVKQVCLSRLNRRLKSSFDFGIKFLSSVDHPNIIRLLDVLQEDGCVYLVLEFCAGGNLASYIQRHGRVQQQIARKFTQHLRSALKILHYRGIIHRDLKPENILLSSQGDDSVLKIADFGLSRTLRPGEYAEIVCGSPLYMAPEVLQFQKYDDKADMWSVGAIVFELLNGYPPFNGRNNVQLLKNIRACTSLPFSQRVLSALDPDCLDMCSRLLCLNPEERLSFDEFYGHRFLRNQNMAGEDGHLKAAKTAYRNAKAEGNRREEARWANVIGDLLKNRGEYVEALKWLRIDYDISLKYLPEKHLLPTCQSLGEIYLRLEHFTDAHTYQKKHLELARDANDLVEQQRASTQLGRTYYELFSRSEHDHNSIRNAKKYFKSAMELAQVIKENPPTSYSSHVKEYIDAHNNRGMLEMELDNLEEAKKILSRGLKICDEEEVSRDDDGRSRLHHNLGNVYMELRNWNKARNNIERDIQICNRIGHRQGEAKGYINLGEVNYRTQKYEEALSCYKKALLRAKSLEDEDALVRQIHQNIKIINEAIKVMDELKMEEQNLKKLERDVATARGTPHERKYLLLLNKSIDCLLEKLGIIFAWEKHCKFAKKKKEIVRELCDKEKLADSYMAVGESYQKLREFNKAIKWYTKSLETYRIIGNLEGQALVKINIGNVFDSARNWRGALDAFQESYRIAVEANLHSVQLSALENMHYSNMMRFDDENETRRLKNLIDKLKKSIEKQPETKGMPEDYCSETDTEANCYLSDSGSDAFCSPKTSYRSKNTSAEEEWNEDAPLNSYFQSIRSSSRKITGHIESPSNSLKHTEQSPESYPNPASNHQTVVGRKRIRIILSDDDDEIECLNRKDHRGLLEDAATCDATCGCSAFLSWQVDMLCGTNCAINVEDSSSSFKRMSPHRDSIAVRRSRSLSNDMIAEPDFAGSSKCYTNISGKLLQHDVTRPVLHDSENYQYITFKIEDDFIHVEATSCIVDAQLNIESLKAEVACLYYLQLPIEKKSEGLLPVVQRLKCAGRYIESPETVENFKEHLGNDVVEASIVGWVQKRLIKMYMDSCKELSEVANMKVLKKLYNLEVSDDEIIVSDCDLQDLSVTPLLNSLHSHKTFAVLDLSHNLLGNGTMEKLQKVFSESGQTYGGLTLDLHCNKFGPTALFQICECPAVFARLEVLNISGNRLTDACGSYLSTVLANCTVLCSLNVENCHITTRTIQKIADALDSNSALAQLCIGYNNPVAGNAIVNLLAKLSSMKRFSELNLSGLKLGNHVVDSLCKLAGSTNLSGMMLGSTGIGTEGAMQLAESLSRGTQELVKLDLSYCQLKSNSVLNTSFNLFCSMLELNLEGNPITPEGRDCLSSLLMSPQCCLKVLVLRKCQLGLAGILRITEALAENNYLEELNLSSNAVPNELHPLQLDFSAEGPSQIVETRKEDLPMIVADSEEPLCVLNTDYLQLEVADSEDGLAARVGGGASGLDDSCADSHQRNSSSPDCKFIQQLSTAIAMAKHLQLYDISDNGFPTEAAETFYRSWSLTLRAVPSQKRITDGIVHFEKKENGCCRVKPCCKKY 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0257 1607 FunFam Maternal embryonic leucine zipper kinase 12 287 - -
Lele19g0257 1607 Gene3D Tetratricopeptide repeat domain 438 613 IPR011990 GO:0005515
Lele19g0257 1607 Pfam Protein kinase domain 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0257 1607 SUPERFAMILY Protein kinase-like (PK-like) 14 277 IPR011009 -
Lele19g0257 1607 Gene3D Ribonuclease Inhibitor 1100 1476 IPR032675 -
Lele19g0257 1607 ProSiteProfiles TPR repeat region circular profile. 528 555 - -
Lele19g0257 1607 FunFam Protein TONSOKU 1103 1474 - -
Lele19g0257 1607 SUPERFAMILY TPR-like 656 779 IPR011990 GO:0005515
Lele19g0257 1607 MobiDBLite consensus disorder prediction 845 873 - -
Lele19g0257 1607 SMART tpr_5 348 381 IPR019734 GO:0005515
Lele19g0257 1607 SMART tpr_5 699 732 IPR019734 GO:0005515
Lele19g0257 1607 SMART tpr_5 659 692 IPR019734 GO:0005515
Lele19g0257 1607 SMART tpr_5 528 561 IPR019734 GO:0005515
Lele19g0257 1607 SMART tpr_5 445 478 IPR019734 GO:0005515
Lele19g0257 1607 SMART tpr_5 488 521 IPR019734 GO:0005515
Lele19g0257 1607 SMART LRR_RI_2 1210 1237 - -
Lele19g0257 1607 SMART LRR_RI_2 1151 1178 - -
Lele19g0257 1607 SMART LRR_RI_2 1238 1265 - -
Lele19g0257 1607 SMART LRR_RI_2 1406 1433 - -
Lele19g0257 1607 SMART LRR_RI_2 1322 1349 - -
Lele19g0257 1607 SMART LRR_RI_2 1377 1404 - -
Lele19g0257 1607 SUPERFAMILY TPR-like 297 427 IPR011990 GO:0005515
Lele19g0257 1607 Gene3D Phosphorylase Kinase; domain 1 4 98 - -
Lele19g0257 1607 Coils Coil 578 608 - -
Lele19g0257 1607 SUPERFAMILY RNI-like 1114 1568 - -
Lele19g0257 1607 SUPERFAMILY TPR-like 436 565 IPR011990 GO:0005515
Lele19g0257 1607 Gene3D Tetratricopeptide repeat domain 283 437 IPR011990 GO:0005515
Lele19g0257 1607 Coils Coil 444 478 - -
Lele19g0257 1607 Pfam Tetratricopeptide repeat 659 729 - -
Lele19g0257 1607 Pfam Tetratricopeptide repeat 488 555 - -
Lele19g0257 1607 Pfam Leucine Rich repeat 1379 1399 IPR001611 GO:0005515
Lele19g0257 1607 SMART serkin_6 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0257 1607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele19g0257 1607 PANTHER PROTEIN TONSOKU 281 1606 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Lele19g0257 1607 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Lele19g0257 1607 ProSiteProfiles TPR repeat profile. 659 692 IPR019734 GO:0005515
Lele19g0257 1607 Gene3D Transferase(Phosphotransferase) domain 1 99 282 - -
Lele19g0257 1607 FunFam Protein TONSOKU 282 437 - -
Lele19g0257 1607 Gene3D Tetratricopeptide repeat domain 616 754 IPR011990 GO:0005515
Lele19g0257 1607 ProSiteProfiles Protein kinase domain profile. 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0257 1607 ProSiteProfiles TPR repeat profile. 528 561 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0257 Lele-ChrLele19 1525060 1537411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0257 16 269 CBL-interacting serine-threonine protein kinases AT2G30360 36.923 1.52e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele19g0257 Pkinase 3.8e-66 CL0016