LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele19g0252	ATGCTGGAAAACTCAACTTCATCGGAAACTACCGCTGCTCCCGTCCAGAACCGCCCCGTAGAGGACGGAGGTGGTACTAGGCCTGTCTCCGATAGCCTCAAAGAGCAACGGGGGCTCGCCGACCAGGAGGTTGACCGGAATCCCGCCGGTCAGCGGTGGCCTCGAGAAGAGACATTGGCTTTGCTCAAAATAAGGTCTGAGATGGACATTGCTTTCAGGGATGTAAGCCCCAAAGGTCCTCTCTGGCAACAGGTTTCGAGGAGATTGGCGGAGCAAGGATACCATAGGTGTCCGAAGAAATGTAAAGAGAAGTTCGAAAACATTTACAAGTACCACAGAAGGACGAAGGAAGGGCGTTATGGCCGACCCAGCCGCAAGGCTTATCGTTTCTTTGAGCAACTTGAAGCTCTCCTTCCGCCTCCAACTTCAACAGAAAAGGATACCCCACTGGATGTTGTTCCACATGCCATGCCCTGCTCTATTCGATTCCCTGGTGCAAATAGTAATTCCATCACTTCTTCTTCGAACGAAGAATCTGAACCCAGAAAGAAGAGTAAACTAATCAAGTTTTTCCAGGGATTGATGAGGGAAGTAATAGAGAAGCAAGAGATTCTACAAAAGAATTTTATGGAGCTGTTGGAAAAATGCGAGCAAGATCGAATAGCGAGGGAGGAAGCATGGAGGACGCAAGAATTAGATCGGCTTAACAGGGAGCGTGAGCTTTTTGCTCAAGAAAGATCTGCTGCTGTCGCCAAGGATGCCGCGGTGCTTGCCCTTCTGAAGAAGATGACAGAACAATCAGCATGCCTGGTGCAGCTGCCGGAGAATATTCCGGTTGATCGGAACCTGATTCCAGACGATATAGATAAGAACAAACAAGAAAAAGTCAACGGAGGTTGTACTGTTAGCGTTACGGATAAGCAAGAATGTGGAAATGTTGGGAATTTTATACAGATGAGCTCCTCCCGTTGGCCTAAAGAAGAAGTGGAAGCTCTGATCAGATTGAGGACAGGCCTGGAGCTGGAATGTGAAGGAAATAATGGGCCTAATAAGGGACCCCTATGGGAAGAAATATCCTCAGCAATGAAGAAGCTTGGGTACAATCGCAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTTAAGAGGATGAAGCATAAAAATAAGAGAAAGCCTGAGGATTCAAAGACATGCCCCTATTTTTACCAGCTAGATGAACTATATAGTAAGAAACCAAGGAAGGTCCAAGAATCAGTTGCTTCTTCTGAGAAGGACTTGAAGGCGGAGGAGCTGTTAATGCACATTATGAGCGGTCAAGAAGAGCGACAATCATCTGAAGATGCCGACAGGGAGAAGAAGGACCAGATTGAAGGAGATAAGGAAGATTTGGATCAGATGGTAGGCAATAATACTTCAACAGCAATCATGGGATGA	1446	0.4668	MLENSTSSETTAAPVQNRPVEDGGGTRPVSDSLKEQRGLADQEVDRNPAGQRWPREETLALLKIRSEMDIAFRDVSPKGPLWQQVSRRLAEQGYHRCPKKCKEKFENIYKYHRRTKEGRYGRPSRKAYRFFEQLEALLPPPTSTEKDTPLDVVPHAMPCSIRFPGANSNSITSSSNEESEPRKKSKLIKFFQGLMREVIEKQEILQKNFMELLEKCEQDRIAREEAWRTQELDRLNRERELFAQERSAAVAKDAAVLALLKKMTEQSACLVQLPENIPVDRNLIPDDIDKNKQEKVNGGCTVSVTDKQECGNVGNFIQMSSSRWPKEEVEALIRLRTGLELECEGNNGPNKGPLWEEISSAMKKLGYNRSAKRCKEKWENINKYFKRMKHKNKRKPEDSKTCPYFYQLDELYSKKPRKVQESVASSEKDLKAEELLMHIMSGQEERQSSEDADREKKDQIEGDKEDLDQMVGNNTSTAIMG	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele19g0252	481	FunFam	Trihelix transcription factor GT-2	324	387	-	-
	Lele19g0252	481	MobiDBLite	consensus disorder prediction	1	55	-	-
	Lele19g0252	481	ProSiteProfiles	Myb-like domain profile.	322	382	IPR001005	-
	Lele19g0252	481	MobiDBLite	consensus disorder prediction	435	481	-	-
	Lele19g0252	481	MobiDBLite	consensus disorder prediction	1	15	-	-
	Lele19g0252	481	CDD	GT1	322	389	-	-
	Lele19g0252	481	PANTHER	FI21293P1	29	462	-	-
	Lele19g0252	481	SUPERFAMILY	Homeodomain-like	321	398	IPR009057	-
	Lele19g0252	481	MobiDBLite	consensus disorder prediction	34	55	-	-
	Lele19g0252	481	CDD	GT1	52	116	-	-
	Lele19g0252	481	MobiDBLite	consensus disorder prediction	435	468	-	-
	Lele19g0252	481	SMART	sant	320	384	IPR001005	-
	Lele19g0252	481	SMART	sant	49	111	IPR001005	-
	Lele19g0252	481	FunFam	Trihelix transcription factor GT-2	53	114	-	-
	Lele19g0252	481	ProSiteProfiles	Myb-like domain profile.	52	109	IPR001005	-
	Lele19g0252	481	Pfam	Myb/SANT-like DNA-binding domain	322	411	IPR044822	-
	Lele19g0252	481	Pfam	Myb/SANT-like DNA-binding domain	51	137	IPR044822	-
	Lele19g0252	481	Gene3D	-	324	387	-	-
	Lele19g0252	481	Gene3D	-	53	114	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele19g0252	Lele-ChrLele19	1501600	1503383	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele19g0252	319	414	Trihelix Transcription Factor Family	AT1G76880	42.708	2.53e-15	76.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Lele19g0252		Myb_DNA-bind_4	3.1e-21	CL0123