Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0225 ATGAGCCGAAGGATCGCGTTCAGAACCAGATCGGAGCTCGAGGTTCTGGATGATGGGTACAAATGGAGGAAGTACGGAAAGAAGTCGGTGAAGAACAGTCCGAATCCAAGGAACTACTACAAGTGTTCGTATGGAGGATGCAGTGTGAAGAAGAGGGTGGAAAGGGACAGGGATGACTCGAGCTACGTGATAACAAGTTATGAGGGAGTTCACAACCACGAGATCCCAACTGCTACCTACTTCTCCTCCCTCATCCATCCTAATCCTTGGCCCTTTCACTCTTCTGCAAATTCCTCATCTTCCTAG 306 0.4902 MSRRIAFRTRSELEVLDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVERDRDDSSYVITSYEGVHNHEIPTATYFSSLIHPNPWPFHSSANSSSS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0225 101 Gene3D WRKY domain 1 77 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele19g0225 101 SUPERFAMILY WRKY DNA-binding domain 8 76 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele19g0225 101 SMART WRKY_cls 16 75 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g0225 101 ProSiteProfiles WRKY domain profile. 11 76 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g0225 101 Pfam WRKY DNA -binding domain 17 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele19g0225 101 FunFam WRKY transcription factor 57 2 76 - -
Lele19g0225 101 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 93 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0225 Lele-ChrLele19 1350007 1351077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0225 4 94 WRKY Transcription Factor Family AT5G64810 65.263 7.07e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele19g0225 WRKY 1.2e-23 CL0274