Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0215 ATGAATTCCGTACCCAACTTCTCTGTTGCGGTTTTCTCCCTTTGTTTGCTTTCTCTGCTCTTCTCGGGGTTTGCTTCTGAAGCTGAACTGCGATCTTTGCTTGAATTCAAGAAAGGGATTGAAAGAGATCCGATTAGAAGAGTTTTCGACTCATGGAAGCTGTCTTCACTCAGCGACCTCAACGACTGTCCCCATTCTTGGGCTGGAGTTGCCTGCGAAGAGGGAACCGGCAACGTCACTGCCGTAGTCCTTGACAGGCTCAGTTTGGGAGGTGAGCTGAAATTTCACACTCTACTTGAACTCAAGATGTTAAGGAATCTCAGCCTCTCCGGGAATGACTTTACTGGGCGGCTGCCGCCGGCATTGGGGACATTGACCACTCTGCAGCATTTGGATCTTTCCGACAACAAATTCTACGGGCCGATCCCTGCTCGAATTAATGACCTTTGGGGATTGAATTACCTCAATTTGTCTAAGAATAACTACAAGGGTGGGTTTCCGGGCGGGATATATAATCTTCAGCAGCTGAGAGTGCTGGATTTGCATTCGAATGAGCTTTGGGGTGATATTGGTGATGTATTGTCCGCATTGCGAAATGTCGAGCATCTTGATTTGAGCTCTAATAAGTTCTACGGGGGGCTCTTGCTTGGAGCGGAGAATGTTTCTGGCTTGGCAAATACGGTCCATTTTCTAAATTTGAGTTTCAACGAACTAAATGGCCCCTTCTTTGAGGGTGATTCAATTGCATTGTTTCGTAATTTACAAGTTTTGGATTTGGGTCACAATCAGATCAGGGGCCAGCTTCCCTCTTTTGGGTCGCTGCCGAGCCTTCGAGTTTTGCGACTTGACAGTAATCTATTATTTGGGTCAATACCGGAAGAGTTGTTTGAAACTTCTATGTCAGTAGAAGAATTGGATCTTAGCGGCAACGGGTTTACGGGTTCAATTCCTTCAATCAACTTGACGTCTTTGAACATATTGAATATTTCATCAAATGGTTTATCAGGCTCTTTGCCAACATCTTTGAGAAAATGCACTGTGATGGACTTAAGCAGGAATATGTTAGATGGTGATTTATCTGTTATGCAGAACTGGGACGCCACATTTGAGGTTCTTGATCTGAGTTCAAACAGGCTGTCAGGAAGCTTTCCCAATTTGACAAATCAGTTTCAGGGATTAGCCACACTTGCTCTCAGGAATAATTCCTTAGTTGGATCTTTGCCTCCAAATTTGGGGACCTATTCTAAATTGTCCATGGTTGATTTCAGTTTGAATGAACTTAGTGGCCCTATTCCTGTTAGTTTATTTACTTCAACAACATTGACAAGCCTGAATCTTTCTGGAAATCATTTTACCGGGTCAATTCCTCTTGGAAGCTCAGGAGCCAGGGAATTAATAATTATGACTCCTTATCAGCCAATGGAATATCTTGATTTATCTAATAACTCCTTAAAGGGTATCTTACCTTCTGACATAAGTACGATGGGTGGGCTCAAACTGTTGAATCTTGCTGGGAATGATTTTTCCGGACAGCTGCCCAATGAATTGAGCAAACTTGTTAATCTGGAGTACCTTGATTTGTCTAACAATAGATTTAAGGGACAAATTCCTGATAAGCTTTCATTCAGCTTGAATGTGTTTAATGTGTCCAATAATGATTTATCTGGCGATGTTCCAGTTAATTTGAGGAGGTTTCCTCCTTCATCATTTCACCCTGGAAATCAAAAGCTGAACTTTCCATATTATACTAATGGTAATGGCGCTTCAGTGCCTGATAATATTTATGGTCATGGGAAACGTCATAGTTCAAAGGGAAATATCAAGATAGCCATTATTCTGGCTTCAGTTGGTGCTGCTGTGATGATTGTTTTTGTTTTCTTGGTTTATCATAGAACACAACTTAAAGAATTCCGTGGCCGGAGTGGGTTTGCTGGTCAAAATACTGGAAGGGATATCAAATCAGGAGGACTTGTGCGGCCTTCCCTCTTCAAGTTCCACCCCGCTCAGCCACCAGCAAGTTCATTGAGCTTTTCAAATGATCACTTGCTGACAACTAATTCAAGATCACTCTCTGGACAGTCAGAGTTTGTAACTGAAATTACTGAGCACGGCTTGGCTCAGGGAACAGGAGCAGCTAGTTCAGCTTCTGTAAATCCAGATTTGATGGATAACCCCCCCACATCATCTGGAAGGAAGTCATCTCCGGGTTCCCCATTATCTTCATCCCCCCGTTTTATAGAAGCACATGAAAAACCAGTTATGTTGGATGTGTATTCACCAGATCGCCTGGCTGGAGACCTGTACTTCCTTGATTCTTCCCTGGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCGGAAGTTCTTGGCAGAAGTAGCCATGGTACTTTATACAAAGCTACACTAGACAGTGGTCATATGTTGACTGTAAAGTGGTTACGTGTTGGATTGGTCAAACATAAGAAGGAATTTGCTAGAGAAGTTAAAAGGATCGGTTCCATGAGGCATCCTAACATTGTCTCATTGCGGGCATACTATTGGGGACCCAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATGCCTGGCGACAGCTTGGCTTTACATCTTTATGAGACAACGCCCCGGAGGTACTCACCATTATCATTCATCCAGAGAGTAAGAGTTGCTGTTGAAGTTGCTCGATGTCTTTTATACCTTCATGATCGAGGGCTTCCCCATGGAAATTTAAAGCCAACAAATATATTATTAGCAGGCCCCGAATGCTGCGCACGTCTAACTGACTATGGTCTGCACCGCCTCATGACGCCTGCTGGAATATCAGAGCAGATACTGAATCTCGGAGCACTCGGATACCGAGCTCCAGAACTTGCGTCTGCTAATAAACCAGTCCCATCATTCAAGGCAGACGTGTATGCACTTGGTGTGATCTTAATGGAATTATTAACGAGAAAAAGTGCAGGTGACATAATATCAGGGCAATCCGGGGCTGTTGATCTAACAGATTGGGTTAGGCTCTGTGAGCAAGAAGGACGTGTAATGGACTGTATCGACAGAGACATTGCAGGAGGTGAAGAATCTTCCAGAGAGATGGACGAATTGCTTGCAATATCACTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAATGTCAGACAAGTTTTTGACGATCTTTGTTCTATATCAGCTTGA 3192 0.4358 MNSVPNFSVAVFSLCLLSLLFSGFASEAELRSLLEFKKGIERDPIRRVFDSWKLSSLSDLNDCPHSWAGVACEEGTGNVTAVVLDRLSLGGELKFHTLLELKMLRNLSLSGNDFTGRLPPALGTLTTLQHLDLSDNKFYGPIPARINDLWGLNYLNLSKNNYKGGFPGGIYNLQQLRVLDLHSNELWGDIGDVLSALRNVEHLDLSSNKFYGGLLLGAENVSGLANTVHFLNLSFNELNGPFFEGDSIALFRNLQVLDLGHNQIRGQLPSFGSLPSLRVLRLDSNLLFGSIPEELFETSMSVEELDLSGNGFTGSIPSINLTSLNILNISSNGLSGSLPTSLRKCTVMDLSRNMLDGDLSVMQNWDATFEVLDLSSNRLSGSFPNLTNQFQGLATLALRNNSLVGSLPPNLGTYSKLSMVDFSLNELSGPIPVSLFTSTTLTSLNLSGNHFTGSIPLGSSGARELIIMTPYQPMEYLDLSNNSLKGILPSDISTMGGLKLLNLAGNDFSGQLPNELSKLVNLEYLDLSNNRFKGQIPDKLSFSLNVFNVSNNDLSGDVPVNLRRFPPSSFHPGNQKLNFPYYTNGNGASVPDNIYGHGKRHSSKGNIKIAIILASVGAAVMIVFVFLVYHRTQLKEFRGRSGFAGQNTGRDIKSGGLVRPSLFKFHPAQPPASSLSFSNDHLLTTNSRSLSGQSEFVTEITEHGLAQGTGAASSASVNPDLMDNPPTSSGRKSSPGSPLSSSPRFIEAHEKPVMLDVYSPDRLAGDLYFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVSLRAYYWGPREQERLLLADYMPGDSLALHLYETTPRRYSPLSFIQRVRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPECCARLTDYGLHRLMTPAGISEQILNLGALGYRAPELASANKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSREMDELLAISLRCILPVNERPNVRQVFDDLCSISA 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0215 1063 SMART LRR_typ_2 173 197 IPR003591 -
Lele19g0215 1063 SMART LRR_typ_2 251 273 IPR003591 -
Lele19g0215 1063 SMART LRR_typ_2 519 543 IPR003591 -
Lele19g0215 1063 SMART LRR_typ_2 101 125 IPR003591 -
Lele19g0215 1063 SMART LRR_typ_2 274 298 IPR003591 -
Lele19g0215 1063 SMART LRR_typ_2 321 344 IPR003591 -
Lele19g0215 1063 Gene3D Ribonuclease Inhibitor 218 585 IPR032675 -
Lele19g0215 1063 PRINTS Leucine-rich repeat signature 474 487 - -
Lele19g0215 1063 PRINTS Leucine-rich repeat signature 519 532 - -
Lele19g0215 1063 PANTHER OS07G0626500 PROTEIN 9 1061 - -
Lele19g0215 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 465 - -
Lele19g0215 1063 Gene3D Transferase(Phosphotransferase) domain 1 861 1063 - -
Lele19g0215 1063 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Lele19g0215 1063 FunFam Pollen receptor-like kinase 1 861 1063 - -
Lele19g0215 1063 Gene3D Ribonuclease Inhibitor 25 216 IPR032675 -
Lele19g0215 1063 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Lele19g0215 1063 Pfam Leucine rich repeat 475 532 IPR001611 GO:0005515
Lele19g0215 1063 Pfam Protein kinase domain 787 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0215 1063 SUPERFAMILY RNI-like 106 554 - -
Lele19g0215 1063 Pfam Leucine Rich repeat 438 453 IPR001611 GO:0005515
Lele19g0215 1063 MobiDBLite consensus disorder prediction 708 741 - -
Lele19g0215 1063 MobiDBLite consensus disorder prediction 708 745 - -
Lele19g0215 1063 Pfam Leucine Rich repeats (2 copies) 253 292 IPR025875 -
Lele19g0215 1063 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Lele19g0215 1063 ProSiteProfiles Leucine-rich repeat profile. 521 543 IPR001611 GO:0005515
Lele19g0215 1063 Gene3D Phosphorylase Kinase; domain 1 767 860 - -
Lele19g0215 1063 ProSiteProfiles Protein kinase domain profile. 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0215 1063 SUPERFAMILY Protein kinase-like (PK-like) 786 1058 IPR011009 -
Lele19g0215 1063 FunFam Leucine-rich repeat receptor-like protein kinase 768 860 - -
Lele19g0215 1063 FunFam Nuclear pore complex protein NUP107 26 192 - -
Lele19g0215 1063 FunFam Leucine-rich repeat receptor protein kinase EMS1 467 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0215 Lele-ChrLele19 1293775 1298119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0215 372 564 Receptor kinase-like Gene Family AT5G01890 34.359 7.01e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele19g0215 Pkinase 3.9e-29 CL0016