Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0193 ATGGGGAGTGGAGATAATTTCAGCGATGGGATTGTGGAAACCCGTACTGCTCTGTCAGATTGCACGAATCGTCCCCAGAAGAGGGCGTTTTCATCGATTTCGGGCGATTCGGCTCCTAAATCTGGACATGGGTGTTGTAAGATCGATAACATTGGTGGGGATTTACGTCTGGCAAAGAAAGTTTGTCTCGAAGGCGTGCACGCTGCGGGAGTTTCACAAGGATTGGCAAATCATGCCTCAGAAAATGACGAAAGGGACCGGAGTCTTCACAAACCGGCATCCTCCAAACGCGGGACAACTGAATGGTCACCCATCTCTGGTTCACTGGATTCCAGATTCCCTGGGCTGGAAAGATGTGTAGGACTTAGGGGCGATGGCGGTGAAAATTCAACTGAGGACGGGGATCCTCTCAAAGCTTGCTCTTGTTTTGTTTGCTCCACTGCTGCTTATATGTGGTCGGACCTCCATTACCAGGATATCAAAGGTAGACTAAGTGCTCTGAAGAAGAGTCAAAAAGAAGCAGCAAAGATGGTTCAGAAAATTTCTGGAGCAAAGGACAATGTTGCGCACAACCAACGAACTTCTCCGGAGTCATTAAAACTAGAATTGGACCTAATGGATCAGTGGAGCTCGCTGTTTGTTCATATGGAGAATACTCTGGCTCACGAAAGTAGCCAGCTTGAATCAAGTTTTGAAAAACTTAAAGACCTGAGGGAGAGCTTCAAGAACGATCAAGAGGAGATTGACAAGGGGCGTTTTCACGGATGTCCGCAATCCAATACCAGCATCAGCGATTCAGGTAGAGATTCCTGTTTTCTAAAAGTTTCTTCTATTTCCCCCCTTCAAGCTGCATCTTTCTTCAACCTGTGCCCTGTTTTTCAAATTGAGACAGGCCTTCTTATATATTTCGTTTTAGATTCCTTTTCCCCCCGTGATTTTCTCGTCCTGTGCAGCATGGCGGCAACTATAGGTTTGTATAATAATAGCGGCAGCGTGGCATCAGATTTCTTAGATCCGTGTAGTGAAGATCTGATAAAGGCGCTCGAACCTTTTATGAAAATGGATTCGTCGACGTCTTCTCTGTCTTCTATCTCTCTTCCATCTTCGCCTTCCTGCTCTTATACTCCACCCACTTCTATGTCCGGTTATTATCCCAACCTCCGAACAGCACCGAACTCCCACATATTTTCTCCGGGGTTCTCGAGTGGCATAGGGCTTAACCAATTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCAGGTCCGACAGCAACAATCCCTCGACCTCCTCCGCCCTAAACGTGTCCCCATGAAACATGTCCGTAATGCTCCGAAACCCACGAAACTATACCGAGGAGTGAGGCAGAGGCATTGGGGGAAATGGGTGGCTGAGATCAGACTCCCAAAGAACCGAACCCGTCTCTGGCTCGGCACTTTTGACACGGCCGAAGAGGCTGCCTTGGCTTATGACAACGCTGCTTATAAGCTCAGGGGTGACTTCGCTCGCCTTAATTTCCCTCATCTGCGTCACCAAGGAGCTCACGTGTTTGGCGAATTTGGGGATTACAAACCTCTTCATTCCTCCGTCGATGCCAAGCTTCAAGCTATTTGTGAAAGTTTGGCCAATTCCCAGAAACAGGGGAGTGCAAGGGATTCTTGCTCCGTCGGTGAGTCAAAGCCTAAGGTGGCGTCAGACGAGTCAGAATCGAAAAGTGATGTGGAGGATTGTAAGGTGGAGAACACAGCATCGTCGCCCTTGTCTGACGAATCCTGGGCCGGCTCGTCTTCCCCCGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAAGGATGAAACCATCGACTTCGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGACTGGTCTGCTATTTGA 1902 0.4842 MGSGDNFSDGIVETRTALSDCTNRPQKRAFSSISGDSAPKSGHGCCKIDNIGGDLRLAKKVCLEGVHAAGVSQGLANHASENDERDRSLHKPASSKRGTTEWSPISGSLDSRFPGLERCVGLRGDGGENSTEDGDPLKACSCFVCSTAAYMWSDLHYQDIKGRLSALKKSQKEAAKMVQKISGAKDNVAHNQRTSPESLKLELDLMDQWSSLFVHMENTLAHESSQLESSFEKLKDLRESFKNDQEEIDKGRFHGCPQSNTSISDSGRDSCFLKVSSISPLQAASFFNLCPVFQIETGLLIYFVLDSFSPRDFLVLCSMAATIGLYNNSGSVASDFLDPCSEDLIKALEPFMKMDSSTSSLSSISLPSSPSCSYTPPTSMSGYYPNLRTAPNSHIFSPGFSSGIGLNQFTPSQILQIQAQFQVRQQQSLDLLRPKRVPMKHVRNAPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGDFARLNFPHLRHQGAHVFGEFGDYKPLHSSVDAKLQAICESLANSQKQGSARDSCSVGESKPKVASDESESKSDVEDCKVENTASSPLSDESWAGSSSPESDITFLDFSDSKDETIDFGLEKFPSVEIDWSAI 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0193 633 PRINTS Ethylene responsive element binding protein signature 474 490 IPR001471 GO:0003700|GO:0006355
Lele19g0193 633 PRINTS Ethylene responsive element binding protein signature 452 463 IPR001471 GO:0003700|GO:0006355
Lele19g0193 633 Coils Coil 167 187 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 15 38 - -
Lele19g0193 633 Gene3D AP2/ERF domain 451 509 IPR036955 GO:0003700|GO:0006355
Lele19g0193 633 Coils Coil 227 247 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 549 606 - -
Lele19g0193 633 ProSiteProfiles AP2/ERF domain profile. 451 508 IPR001471 GO:0003700|GO:0006355
Lele19g0193 633 FunFam Ethylene-responsive transcription factor 2 450 509 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 79 94 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 76 109 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 580 605 - -
Lele19g0193 633 CDD AP2 450 510 IPR001471 GO:0003700|GO:0006355
Lele19g0193 633 Pfam AP2 domain 452 500 IPR001471 GO:0003700|GO:0006355
Lele19g0193 633 SUPERFAMILY DNA-binding domain 451 509 IPR016177 GO:0003677
Lele19g0193 633 MobiDBLite consensus disorder prediction 15 41 - -
Lele19g0193 633 MobiDBLite consensus disorder prediction 563 579 - -
Lele19g0193 633 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 331 633 - -
Lele19g0193 633 SMART rav1_2 451 514 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0193 Lele-ChrLele19 1169360 1175096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0193 319 633 AP2-EREBP Transcription Factor Family AT1G78080 49.425 6.36e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele19g0193 AP2 2e-14 CL0081