Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0192 ATGTCGGGCACGAGTGGTAGTTATGATGAGTTGACGACCTCTCCTTTTTTACTTCCCCTGCTCTTGATCATGACGCAGCAGAATGTGATGGTTTCCGATGCTTATCCTGGACTCAACATGGCTATTACCGTCTCCGTTTCAAACTCCTCCATTTTCACGGCCACCGCACACAAACCGCCGTCCGTCCCTTCCGGCTTTATTTCCATTCCCCGGAGAAAGGTGCTCAAGAACCTTGAAATCAATGCCTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCACGCCAAATCCACTACTTCTCTCGCCGAAGAACACAGCTCTTGGATTCTTCACCACCCCTCTGCATTAGACATGTTCGAGCAAATCATCGATGCCTCGAAAGGCAAGCAGATAGTTATGTTTCTGGATTACGACGGCACGCTCTCACCTATCGTGAACGACCCTGACCGGGCTTTCATGTCCGGCGAAATGAGAAAAACTGTGAGAAAACTCGCAAGGTGTTTTCCAGCTGCCATAGTAAGCGGCAGATGCAGAGACAAGGTATACGGCTTCGTTCGCCTGGCAGAGCTATATTATGCGGGAAGCCATGGCATGGATATCAAAGGCCCAACAAGATGCTCCAAATACAATAAAGGAAGCAAAGCAGAGGCAATTCTTTTTCAGCCAGCCAGTGAGTTTCTTCCCATGATAGACGAGGTGTACCGAGCGTTAGTTGAGAAAACCAAATCAACACCGGGAGCGATGGTGGAGAACAACAAGTTCTGCGCCTCTGTTCACTATCGTTGTGTTGATGAGAAGAAATGGAGTGAACTGGCTCACCAAGTGAAATCTGTGCTTAAGGAGTACCCGAAGCTTCGTCTCAGCCAAGGAAGGAAGGTGATTGAGATTCGTCCCGCTATTAAGTGGGACAAAGGGAAGGCCCTGGAATTTCTGCTAGAGTCACTTGGATTTGCCAATTGCGATGATGTCTTCCCTGTCTACATTGGTGATGATCGAACCGACGAAGATGCCTTTAAGAAACTGAGAGACAGAGGACAAGGTTTGGGGATTCTTGTGTCAAAATTTCCAAAGGACACTAGTGCATCTTACTCATTGCAGGAACCCGAGGAGGCAAGTACAAGTGTACCACCGATCCTTTGTTGCTTTTTATTTTTTCAAACGCTCCTCGTGAAGGAGTTTCTTCAACGTTTGGTGGAGTGGAAACAAGCATCGCAGCGTACATGCTCCAAAGTCTAA 1236 0.4814 MSGTSGSYDELTTSPFLLPLLLIMTQQNVMVSDAYPGLNMAITVSVSNSSIFTATAHKPPSVPSGFISIPRRKVLKNLEINAWVDSMRASSPTHAKSTTSLAEEHSSWILHHPSALDMFEQIIDASKGKQIVMFLDYDGTLSPIVNDPDRAFMSGEMRKTVRKLARCFPAAIVSGRCRDKVYGFVRLAELYYAGSHGMDIKGPTRCSKYNKGSKAEAILFQPASEFLPMIDEVYRALVEKTKSTPGAMVENNKFCASVHYRCVDEKKWSELAHQVKSVLKEYPKLRLSQGRKVIEIRPAIKWDKGKALEFLLESLGFANCDDVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPKDTSASYSLQEPEEASTSVPPILCCFLFFQTLLVKEFLQRLVEWKQASQRTCSKV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0192 411 FunFam Trehalose 6-phosphate phosphatase 229 378 - -
Lele19g0192 411 Pfam Trehalose-phosphatase 134 368 IPR003337 GO:0003824|GO:0005992
Lele19g0192 411 Gene3D - 133 365 IPR023214 -
Lele19g0192 411 Gene3D - 213 299 - -
Lele19g0192 411 TIGRFAM T6PP: trehalose-phosphatase 129 370 IPR003337 GO:0003824|GO:0005992
Lele19g0192 411 CDD HAD_TPP 132 370 - -
Lele19g0192 411 SUPERFAMILY HAD-like 132 370 IPR036412 -
Lele19g0192 411 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 133 344 IPR006379 -
Lele19g0192 411 FunFam Trehalose 6-phosphate phosphatase 131 218 - -
Lele19g0192 411 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Lele19g0192 411 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 53 407 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0192 Lele-ChrLele19 1153456 1156128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0192 133 341 Trehalose Biosynthesis Gene Families AT1G23870 26.906 8.14e-09 55.8