Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0178 ATGCCAGTGGGAATGGACTTCCTAATTGTGCTTTTACTATTGGCTTGCTTATGCTCTTTTGTATCTTCTGATTTTCAAGGAGATGCACTATTTGCACTGAAGTTATCATTGAATGCTTCAGCTAATCAGCTTACTGACTGGAATCAAAATCAAGTAAACCCTTGTACTTGGTCCCGTGTTGACTGTGACCAAAATTCCAATGTTGTTCAAGTTTCATTAGCATTGATGGGATTTACTGGGGTCTTGACCCCAAGAATTGGAGCTCTAAAAAGTCTTGCAACTCTTTCATTGCAAGGGAATGGCATCACCGGTGAAATACCAAAAGAAATGGGGAATCTGACTAGCTTAATCAGACTTGATCTGGAAAACAACAGATTAGCGGGAGAAATACCATCTACCCTTGGTAATCTTATAAAGCTTCAGTTCTTGACTTTGAGTCAGAACAATCTCAGTGGGAATATTCCTGAATCACTTGGCAGTCTTCCTAGTTTGATCAATGTTCTGCTGGACTCAAATAATCTCAGTGGTCGAATTCCTGAGCAGTTATTCCACGTTCCTAAATACAATTTCAGTGGAAATAAGTTAAATTGTGACATGAATTACCGCCATCTTTGTGCCTCTGATAATGCAGATCAAGGCTCATCCCATAAGCCGAAAATTGGCCTTATAGTTGGAATTATTGTTGGGTTAATTGTTGTAATTTTTCTCGCTGGTTTGCTGTTCTTCTGGTGTAAGAGTAGACGCAAGGGCTACAGGCGAGAAGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGCCGAATTGCATTTGGTCAACTAAAAAGATTTGCTTGGAGAGAACTACAGATAGCCACTGACAACTTCAGTGAGAAGAATGTTCTGGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTTCTCGCTGATAACACTAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATGCTGCTTTCCAGCGGGAAGTTGAGATGATAAGTGTAGCTGTCCATCGGAACCTGTTACGGCTGATTGGATTTTGTACTACTCCAACTGAACGTCTTCTAGTTTATCCCTTCATGAAGAACTTAAGTGTTGCCTATCGACTAAGAGAACTGAAACCTGGAGAACCTGTTTTAGACTGGCCAACAAGAAAGCTAGTAGCTTTAGGCACGGCCCGGGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGGGATGTTAAGGCTGCAAATGTATTACTAGATGAGGATTTTGAGGCAGTTGTTGGTGACTTTGGTTTGGCAAAGTTAGTTGATGTTCGAAAAACTAATGTGACAACTCAAGTTCGTGGGACGATGGGCCACATAGCTCCTGAATACTTGTCCACTGGGAAATCTTCTGAAAGGACAGATGTTTTTGGTTATGGCATTATGCTTTTGGAGCTTGTTACTGGTCAACGGGCAATTGACTTTTCACGTTTGGAAGAGGAAGATGACGTGTTATTACTTGACCATGTTAAGAAACTAGAAAGGGAAAAACGTCTAGATGCTATTGTCGACTGCAACCTAAATAAAAATTACAACATACAAGAAGTTGAAATGATGATAAAAGTTGCATTACTCTGCACCCAAGCTTCACCAGAGGACCGTCCAGCGATGTCAGAGGTTGTTAGAATGCTGGAAGGAGAAGGGCTGGCTGAAAGGTGGGAGGAATGGCAACATGTGGAGGTTACTCGGAGGCAAGAATATGAGAGACTGCAAAGAAGATTTGACTGGGGAGAAGATTCAGTTTATAACCAAGATGCCATTGAGTTGTCTGGTGGCAGATGA 1833 0.4152 MPVGMDFLIVLLLLACLCSFVSSDFQGDALFALKLSLNASANQLTDWNQNQVNPCTWSRVDCDQNSNVVQVSLALMGFTGVLTPRIGALKSLATLSLQGNGITGEIPKEMGNLTSLIRLDLENNRLAGEIPSTLGNLIKLQFLTLSQNNLSGNIPESLGSLPSLINVLLDSNNLSGRIPEQLFHVPKYNFSGNKLNCDMNYRHLCASDNADQGSSHKPKIGLIVGIIVGLIVVIFLAGLLFFWCKSRRKGYRREVFVDVAGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMKNLSVAYRLRELKPGEPVLDWPTRKLVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDCNLNKNYNIQEVEMMIKVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQEYERLQRRFDWGEDSVYNQDAIELSGGR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0178 610 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Lele19g0178 610 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Lele19g0178 610 CDD TM_EGFR-like 218 252 - -
Lele19g0178 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Lele19g0178 610 Gene3D Transferase(Phosphotransferase) domain 1 364 581 - -
Lele19g0178 610 ProSiteProfiles Protein kinase domain profile. 287 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0178 610 FunFam Putative LRR receptor-like serine/threonine-protein kinase 23 207 - -
Lele19g0178 610 SUPERFAMILY Protein kinase-like (PK-like) 267 562 IPR011009 -
Lele19g0178 610 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Lele19g0178 610 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 572 - -
Lele19g0178 610 Pfam Protein kinase domain 288 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0178 610 SMART serkin_6 287 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0178 610 FunFam Somatic embryogenesis receptor-like kinase 1 364 581 - -
Lele19g0178 610 FunFam Somatic embryogenesis receptor kinase 1 256 363 - -
Lele19g0178 610 SUPERFAMILY L domain-like 27 198 - -
Lele19g0178 610 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0178 Lele-ChrLele19 1051471 1055661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0178 5 610 Receptor kinase-like Gene Family AT5G10290 78.548 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele19g0178 Pkinase 9.8e-43 CL0016