Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0170 ATGGAACGGTATGATATAATCAGAGATATTGGTTCCGGCAACTTTGGGGTGGCGAAGCTGGTGAAGGATAAACGGAGTGGTGACTTATATGCTATCAAGTTCATTGAGCGAGGCTCAAAGATTGATGAGCATGTGCAAAGGGAGATCATAAACCATAGGTCCTTGAAGCATCCCAATATCATTCGATTCAAAGAGGTGTTGCTCACTCCGACACATCTTGCCATAGTGATGGAATATGCTGCTGGAGGAGAACTGTTTGAAAGAATTTGCAATGCGGGTAGATTCAGTGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGGTTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAGCTAGAAAACACACTCTTAGATGGAAGCACAGCGCCACGTCTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCTGTTCTGCACTCTCAGCCCAAATCTACTGTAGGAACCCCTGCTTATATTGCACCAGAGGTTTTGTCACGAAGGGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCCTATCCTTTTGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGCATTCTCAGCGTCCACTATTCTGTACCAGACTATGTTCGTATCTCAAAAGAGTGTAAACACCTTCTATCAAGAATATTTGTGGCCGACCCAGAGAAGAGAATTACGATCCCAGAAATCAAAGTGCACCCGTGGTTCCTGAAGAACTTGCCACTAGAATTTATGGACGAAGGGAGACAAACTGGGAAGCAAGAAGATTTAGTGAACGATCCATGCGGGAGGCAGAGCATCGAAGAAATATCGAGTATAATTCAAGACGCTCGAAAAGCAGGGGATCAAGGCCCAAAAGTTGGCGGGCAGTTCGTGGGGATTGGAAGCATGGATCTTGATGAGCTGGATACTGACGCTGACATTGATGATCTAGAGGCAAGCGGCGATTTTGTCTGTGCTTTGTGA 1038 0.4461 MERYDIIRDIGSGNFGVAKLVKDKRSGDLYAIKFIERGSKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLVSGVSYCHSMEICHRDLKLENTLLDGSTAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSVPDYVRISKECKHLLSRIFVADPEKRITIPEIKVHPWFLKNLPLEFMDEGRQTGKQEDLVNDPCGRQSIEEISSIIQDARKAGDQGPKVGGQFVGIGSMDLDELDTDADIDDLEASGDFVCAL 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0170 345 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Lele19g0170 345 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Lele19g0170 345 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0170 345 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0170 345 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Lele19g0170 345 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele19g0170 345 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele19g0170 345 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele19g0170 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele19g0170 345 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0170 345 PANTHER SERINE/THREONINE KINASE 2 279 - -
Lele19g0170 345 CDD STKc_SnRK2 3 259 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele19g0170 Lele-ChrLele19 1006852 1009376 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0170 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 42.238 3.46e-68 218
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele19g0170 Pkinase 2.8e-72 CL0016