Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0153 ATGGCTACCTGTTCTTCACTTTTACCTCACACTCATGATTCTTCCTCTTTGAAGCGGAAGAGGCCCCTCAATATTCAGATCCCAGACGTCTTGCGAGAAATCCAGATACCCAAGCTTAATGATTCCAAGGCATTGAAGGACAACGTTTCTCTCAGCGGAATTGGCTTTGCGGTTTTTTCTGTAAAAGGCAAGAAATCGTGCATGGAAGATGCTCACAAGATTGTTTCTTCTCTAGAGAGCGACCCAAAAAAAGGCTTTTTTGGGGTCTACGATGGGCATGGCGGCAGGAAGGCCGCAGAGTTTGTAGTTGAGAACTTACACGCCAATATTCTCGAAATGATGGAGAATTGTGAAGAGTCAAGGGCCAAGGAGGAGGCAGTTAAAGCTGGGTATCTAAAGACTGATGAAGAGTTCTTGAAAAAGGGTATAGGAAGCGGTGCCTGTTGTGTGACGGCCCTGATCCAAGGGGAAGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGTTCTCACTAGGGATCACAGAGCGGAACTAGAGGATGAACGGAGAAGAATTCAGGAAAAGGGAGGATATGTGGAGATCCATCGAGGAGCTTGGAGAGTTCATGGGGTACTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGATTGGGTGGTGTCTGAACCTGATACCAAGATCTTACAATTAACTTCAGACATGGAGTTTCTCGTGTTGGCTTCTGATGGACTGTGGGAAGAGGTCGGTAACCAAGAAGCTGTTGATACTGTGACACGTTTTTGTCGAAATGAAGAGAAGCTAGGCTCACTGGGAGATGTAGAGAATGATATTGATGATGATTATGGTCAAGTAAACGTAAGTCCGTCATCGAAGCTACGAAGAGTTTCACTTGTGAAGCAGTCAAGGGGGGGCCATAAAAAGTCACTGAATGATTGGAATGAAGTTGGTGAAGATGATTTTGGTTGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATTTCATTGGTGAAGCGAGTGAGCATGAAAAAAGAGACGCCAACAAAAGAAAGTAATATGTGCAAGAAAAATGCAGCCTCTGGACTTCAAGCGGCTTGTAAGGAGCTTGTAAACCTTGCTGTGAAAAGGGGGACTTTGGATGATATAACTGTAATGATAATTGATTTAAAACACTACAGGGCTGGACTTGAGTTTCAAGGCTGCAAAAGGAAATCGGACTTAATCGGACTCGCAAAACGATGCCCAATGCCCATGAAACAAACTCAACCTAACCCTACATTACTTCCGTGTTCAGCAACCATTCTTCAAACTCAACCTTCAGCTCTAGTTACGGCGGCGGCAAAAGCTCTGGAACAATTGGTCAGGCAGACTTAA 1407 0.4478 MATCSSLLPHTHDSSSLKRKRPLNIQIPDVLREIQIPKLNDSKALKDNVSLSGIGFAVFSVKGKKSCMEDAHKIVSSLESDPKKGFFGVYDGHGGRKAAEFVVENLHANILEMMENCEESRAKEEAVKAGYLKTDEEFLKKGIGSGACCVTALIQGEEIVVSNVGDCRAVLCRGGVAEVLTRDHRAELEDERRRIQEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKDWVVSEPDTKILQLTSDMEFLVLASDGLWEEVGNQEAVDTVTRFCRNEEKLGSLGDVENDIDDDYGQVNVSPSSKLRRVSLVKQSRGGHKKSLNDWNEVGEDDFGCENESPPSKSRRISLVKRVSMKKETPTKESNMCKKNAASGLQAACKELVNLAVKRGTLDDITVMIIDLKHYRAGLEFQGCKRKSDLIGLAKRCPMPMKQTQPNPTLLPCSATILQTQPSALVTAAAKALEQLVRQT 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0153 468 Gene3D - 49 405 IPR036457 -
Lele19g0153 468 CDD PP2Cc 54 278 IPR001932 -
Lele19g0153 468 PANTHER PROTEIN PHOSPHATASE 2C 43 399 IPR015655 GO:0004722|GO:0006470
Lele19g0153 468 ProSiteProfiles PPM-type phosphatase domain profile. 55 400 IPR001932 -
Lele19g0153 468 SMART PP2C_4 41 398 IPR001932 -
Lele19g0153 468 Coils Coil 103 123 - -
Lele19g0153 468 SUPERFAMILY PP2C-like 49 402 IPR036457 -
Lele19g0153 468 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Lele19g0153 468 Pfam Protein phosphatase 2C 56 275 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0153 Lele-ChrLele19 924037 926166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0153 15 404 PP2C-type Phosphatase Gene Family AT1G67820 53.535 1.13e-132 387