Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0141 ATGAGGCTGCGGAACTGTTGGAGACTGATGGAGAACGTTGGAGGAGGTTCGTCTTCGAACAACGACAACAGCGGAATCAAGGAGCAGGACAGCTTGTTGCCGATAGCGAATGTTGGTCGGATCATGAAGCAGACACTACCTCAGAACGCCAAGATATCCAAGGAAGCGAAGGAGACCATGCAGGAATGCGTGTCGGAGTTCATAAGCTTTGTGACCAGCGAGGCGTCGGAGAAGTGCCGGAAGGAGAGGAGGAAGACGGTGAATGGGGATGACATATGCTGGGCCTTGGCCGCGCTTGGTTTTGATGACTATGCCGACCCACTGAGGAGGTATCTGCACAGATTTAGAGAGTTAGAGGTTGACAGAGCTAACCATGACAGAGGAAATAGCCCTCAAGACAGGGATGACCTCTATCAAATTCCCTCCAGAGGAATCAGGCACTGA 444 0.5203 MRLRNCWRLMENVGGGSSSNNDNSGIKEQDSLLPIANVGRIMKQTLPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALAALGFDDYADPLRRYLHRFRELEVDRANHDRGNSPQDRDDLYQIPSRGIRH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0141 147 Gene3D Histone, subunit A 19 140 IPR009072 GO:0046982
Lele19g0141 147 MobiDBLite consensus disorder prediction 123 147 - -
Lele19g0141 147 FunFam Nuclear transcription factor Y subunit B-3 21 142 - -
Lele19g0141 147 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 19 123 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele19g0141 147 SUPERFAMILY Histone-fold 29 134 IPR009072 GO:0046982
Lele19g0141 147 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Lele19g0141 147 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Lele19g0141 147 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Lele19g0141 147 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele19g0141 147 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 96 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0141 Lele-ChrLele19 867877 868637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0141 26 136 CCAAT-HAP3 Transcription Factor Family AT2G47810 72.072 3.59e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele19g0141 CBFD_NFYB_HMF 6.7e-28 CL0012