Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0126 ATGGACCCTCAATACCCTAAACCTCGATCCTATGCACCACAGATGGAGATGACAATTCCCCCCTCCCAGCTTTCCGACAACGATCGCAGCAGCTCCGAACTGCGAGCTCTCGATTGTAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCATGCTCCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCTAGTGCTCCTGTTGTGACCCTGCATGTTGATGACAAGAATGTTAATGATGAGGCAATCACAATGGCTTTGGCATACCTCTACGGGCACCACCCTAAGCTTAATGATAGTAATGCATTTCGTGTTCTTGCTGCCGCATCCTTTCTTGACCTCCAGGACTTATGTGCAATATGTACAGACTTCATTATATCTGAGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTATTTGCAGAAAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAGTTGAAAGAGGTGCTCCCGAAACTTTCTTCTCAAACATTACATGCATTACTAACCTCTGATGAACTGTGGATACCAAGTGAAGAGAAACGGTTTGAATTGGCATTACACACATTCCTGGCAAAAAATGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGAAGTTCTGGTTCTGAGACTGCGACTAATACCCATTCTGATTCTGATAATATTAAGGGAAAAAATGGAGCTGATAACTGCACAAGTAATTGGTTGGGAACTGATATAGGGCGTCTGAATATTAAAAGTGATGTCAAGGACACTGTTGATCATAATCTGCAAGTTGAGCTTGCAGACGGTGTGGCACACTTCAGCAATGAGGATTCTAATTCTCATCAATTGGCACAAGCAACATCATTTGCTGGTTCATCAAATTTTGAACCTAGATATGCTTGCAACATGGAGGGGCCTTCGTCAATCAGTAATTTGTTGTCAGAAAAAGATGGGACCGGAAGATCATGTTCTTATGTTGAGATGCCTCTCACTGCAGGAGCAACTGGAGTGGCTCTTGAAGGGCCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCTCACATCCAGTGATTGGGGAAGATACAGTGTGCCTCTTTTTCCATGGGGCGGCCGGGTAGTTGGTGGAAGGCTGCTTAAAGCTCACTCCAAAGGAAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCGCTTCTGAATGTCAGAAAGCAACTAGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCCGATACATGCAAAGCTTGTTGCCTTGTGAGTGCAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACAACTCCTAGTTACTACATGCAAGAACACAAGCAGAATAATAATTCTGGGAACATGGGAAACATATATGTTGCTGAGTCTTCTCAAAGTGAAGGAAGTGGCTTATTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGTCGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGCGTGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCGGCTAATGATGATTCAGAGACACAAGCTGACCACAACGGAGACATGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAGTGGAACCAATGCACATGGAGAGATGACACAAAGGGGATATGAGACTGGCATGCGAAGCAGGATCTCTGGAACTGCTGCTGGAGGCCCAAGTACTGGTGGCATACCCATGCAAATGTTAGAGACACCAGAACATGCCATAGGAATAGAATGGGAGAATACTAGCAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCCTTTCGTTTTGGGGTGCAATTTGAGGACGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCTCAGGGACGGAGAACTCTCGGATTGTTTCTTCACCGTCGAAAAGCAGAGATTGCGGATTTACATAGAAAGGTGCACATGTATGTGGATTATCGCGAAAAGGTGACTGCTCGCTATCAGTTGATTTGCCCGTCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAGACGGGCACTCTTCTACCCAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTGACGAGCTTGCCGATCTTCTGCAAAACGGGGCCCTTCGAATAATTGCTGTAGTGCAGCTCGTTTAA 2550 0.4545 MDPQYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIMLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAITMALAYLYGHHPKLNDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALHTFLAKNAHWKAEHPEQGSSGSETATNTHSDSDNIKGKNGADNCTSNWLGTDIGRLNIKSDVKDTVDHNLQVELADGVAHFSNEDSNSHQLAQATSFAGSSNFEPRYACNMEGPSSISNLLSEKDGTGRSCSYVEMPLTAGATGVALEGPSEEGSNSSCNGLTSSDWGRYSVPLFPWGGRVVGGRLLKAHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKACCLVSAACTCRQPFAFSQGVTTPSYYMQEHKQNNNSGNMGNIYVAESSQSEGSGLFRPVRVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDDSETQADHNGDMSGDGLTALVGLSQGGSSGTNAHGEMTQRGYETGMRSRISGTAAGGPSTGGIPMQMLETPEHAIGIEWENTSSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEIADLHRKVHMYVDYREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0126 849 SUPERFAMILY POZ domain 53 157 IPR011333 -
Lele19g0126 849 MobiDBLite consensus disorder prediction 16 31 - -
Lele19g0126 849 Pfam BTB/POZ domain 53 157 IPR000210 GO:0005515
Lele19g0126 849 ProSiteProfiles BTB domain profile. 59 129 IPR000210 GO:0005515
Lele19g0126 849 Gene3D Potassium Channel Kv1.1; Chain A 25 192 IPR011333 -
Lele19g0126 849 SMART BTB_4 59 159 IPR000210 GO:0005515
Lele19g0126 849 MobiDBLite consensus disorder prediction 601 620 - -
Lele19g0126 849 MobiDBLite consensus disorder prediction 244 274 - -
Lele19g0126 849 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 849 - -
Lele19g0126 849 MobiDBLite consensus disorder prediction 1 31 - -
Lele19g0126 849 MobiDBLite consensus disorder prediction 250 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0126 Lele-ChrLele19 773643 784017 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele19g0126 BTB 2e-14 CL0033