Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0108 ATGATGCGGAAAATTCAGCCCAAGAAAATAATAATGCCGAAAAGGTCAACAATAATGCCCCATGGACAAGAGCGTGGGAGAACAGAATTTCTCCAGACACCAATGGAAAACCTGATCGGCCTTCTAAGGGTTCGGATCAAGCGTGGGGTGAACCTCGCCGTTCGTGATGTTCGTAGCAGCGACCCTTACGTCGTCGTAAAGATGGGCAAACAGAGACTCAAGACTCGGGTGATAAAGAAAGATGTAAATCCGGAGTGGAACGAAGACCTGACCCTTTCAGTGACGGACCCGGATCGTCCAATAAAATTGACGGTGTATGACCACGACACGTTCACCAAAGATGACAAAATGGGTGAAGCAGAGTTTGAGATAAAACCGTTTATAGAATCGGTACATATGAAGTTGGAAGGGCTGCCGAGTGGGACGGTGATAAGAAGATTGCATCCGGCGAGGCAAAACTGCTTGGCGGATGAGAGCTGCATTACGTACAGCGAAGGCAAGATTGTGCAAGACTTGGTGCTCAGATTGCGCAATGTTGAATGTGGTGAAGTTGAGATCCAATTGGAATGGATCCGCGTTCCTTCTCATGCCCGTTCTATTTAG 603 0.4776 MMRKIQPKKIIMPKRSTIMPHGQERGRTEFLQTPMENLIGLLRVRIKRGVNLAVRDVRSSDPYVVVKMGKQRLKTRVIKKDVNPEWNEDLTLSVTDPDRPIKLTVYDHDTFTKDDKMGEAEFEIKPFIESVHMKLEGLPSGTVIRRLHPARQNCLADESCITYSEGKIVQDLVLRLRNVECGEVEIQLEWIRVPSHARSI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0108 200 SMART C2_3c 41 136 IPR000008 -
Lele19g0108 200 Gene3D C2 domain 36 199 IPR035892 -
Lele19g0108 200 CDD C2_ArfGAP 39 182 - -
Lele19g0108 200 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 134 IPR035892 -
Lele19g0108 200 Pfam C2 domain 40 126 IPR000008 -
Lele19g0108 200 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 37 195 IPR044562 -
Lele19g0108 200 ProSiteProfiles C2 domain profile. 20 137 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0108 Lele-ChrLele19 694323 696478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0108 72 195 C2H2 Transcription Factor Family AT1G70790 56.349 2.16e-49 155