Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0104 ATGGTGGGACATAACGACGGTGGTGAGATTAACGTGGTTGATCCCCCATTCAGTGGAAGAAAGCTCAGGCCACTCATTCCGAGGCCAGTGACTTCTTCCGATTATACTTCATCCACAACTCCACCTTGCCTAAGAAGTATTCACGGCTCCGATTTGTTTAATCAATATCACGATCTGACATCAACGACGGATCAGAGTAAGAAAGAGTTAAATACTTCTCCAGTCGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAACAGCTAAGAACCCTTGAAGAATTGTATCGGCGAGGAACAAGAACGCCATCTGCCGAGGAAATTCAACATATCACCGCACAGCTGCGGAGATTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAGAAACGGCGCCGTCAGATGGAATCGTCTCCCAGTGATTTTGATAGTCTAGAGAAGGAAGACTTAGGAATCTGTGCCAATACCAAGAGCAACAAAAGCAGTGGCCGCATCAGAGCGAAGAACGGAATCACAGCAAAGAAGAAACTTGATGGAAAGGAATGCCACGTAAGAGCGAGAGCAATTGACCCAAAGCTCATTAAGGCACATGATCTCAGCTTCTTTATATCGCCTCACAGTGAGGGCACGGTCATCCACTTTAACAGTGTCAGGGATGACAAAGTTGATCACTGCGGTGAACCCCAACAAACCCTTGAACTTTTCCCTCTCAGGGGTGGCGATGGCAGTGATAACGTCAACCATGAAGAGTGTGAGATTTCAGTTTCTGCATCAATGAATGCCAACTTGACCCCATGCCAGTTCTTTGAGTTCCTTCCCTTGAAGAATTAA 858 0.4604 MVGHNDGGEINVVDPPFSGRKLRPLIPRPVTSSDYTSSTTPPCLRSIHGSDLFNQYHDLTSTTDQSKKELNTSPVVVSSRWNPTPEQLRTLEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSPSDFDSLEKEDLGICANTKSNKSSGRIRAKNGITAKKKLDGKECHVRARAIDPKLIKAHDLSFFISPHSEGTVIHFNSVRDDKVDHCGEPQQTLELFPLRGGDGSDNVNHEECEISVSASMNANLTPCQFFEFLPLKN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0104 285 SMART HOX_1 76 143 IPR001356 GO:0003677
Lele19g0104 285 CDD homeodomain 80 140 IPR001356 GO:0003677
Lele19g0104 285 SUPERFAMILY Homeodomain-like 79 145 IPR009057 -
Lele19g0104 285 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 64 280 IPR044555 GO:0003700|GO:0099402
Lele19g0104 285 ProSiteProfiles 'Homeobox' domain profile. 84 139 IPR001356 GO:0003677
Lele19g0104 285 FunFam WUSCHEL-related homeobox 4 78 145 - -
Lele19g0104 285 Gene3D - 76 139 - -
Lele19g0104 285 Pfam Homeodomain 79 138 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0104 Lele-ChrLele19 663977 665949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0104 2 146 Wox Gene Family AT3G18010 57.895 1.29e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele19g0104 Homeodomain 8.4e-20 CL0123