Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0098 ATGATACGTAGAGCGATCGCCACTCTCAACGACAGAAACGGCTCCAGCAAGAAAGCCATCCTCAAGTTCATAGAGCAAGCCTACCCGCTCCTTCCTTCAACCAACCACGCCTTGCTCACTCAGCATTTGAATCTCTTGAAAAGCAGTGGTCTTCTTGTCATGGTCAAGAAATCTTACAAGCTCCCTAAATTTGATGCTCCCCCTCCTACCGCCCAAAGAAAACGGGGGGAACATCTGTTGAGGAGAAAACTTGAATATTTTCAATTAAAAATCAATGAATCTCTTGGTGTGATCAAGCCCCATTTTAGCATTGCAAGGCCGGTCAGTGCAATTGCAGCAATTCAAGAATTAGAAATACTAGCAACAATGGACCTTGATGCATCTGGTTCAAGATAG 396 0.4444 MIRRAIATLNDRNGSSKKAILKFIEQAYPLLPSTNHALLTQHLNLLKSSGLLVMVKKSYKLPKFDAPPPTAQRKRGEHLLRRKLEYFQLKINESLGVIKPHFSIARPVSAIAAIQELEILATMDLDASGSR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0098 131 Pfam linker histone H1 and H5 family 1 57 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele19g0098 131 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 63 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele19g0098 131 PANTHER HISTONE H1 1 76 - -
Lele19g0098 131 CDD H15 1 74 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele19g0098 131 SUPERFAMILY "Winged helix" DNA-binding domain 1 74 IPR036390 -
Lele19g0098 131 SMART h15plus2 1 58 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele19g0098 131 Gene3D - 1 76 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0098 Lele-ChrLele19 631798 633117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0098 1 76 Single Myb Histone (SMH) Gene Family AT1G49950 36.842 1.01e-06 44.7