Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0086 ATGGGGAGTAAAACAAACGTGAAAATGATAAACAAGAAAATTTCAGACCTCGATTCGTCCAAGAAAGTGGCCGATAGGTATCTCAAGCGTGAAGTCCTCGGTGAAGGTCAAACAGTTGCAATTAAGAAAATCCGGCTTGGCATGCAGAAGGAAGGGGTAAATTTTACAGCTCTTAGAGAGATTAAAACACTCAAAGAGCTCAAAGATCCAAATATTATTGAGTTCATCGATGCTTTCCCACATAAAGGCAATTTGCATCTAGTCTTTGAATTCACGGAGACGGATCTTGAAGCTGTTACAAGAGACCGGAATATTTTTCTTTCACCAGCGGATATAAAATCATACCTTCAAATGACTCTGCAAGATTTTGGTTTAGCTCGAATCTTTGGGAGCCCAGACGGAAGATTTACTCATCAGGTGTTCGCTTGGTGGTATAGAGCACCTGTGTTATTTGGTACCAAGCAATATGGTTCAGGGGTAGACGTTTGGGCAGCAGCTTGTATATTTGCTGAACTTCTTTTTCGTCGACCCTTTTTGCAGGGTTCAAGTGACACTGATCAATTAGGTAAGATTTTTGCAGCATTTGGGACACCAACTCCTTCTCTGTGGCCGGATATGGTATACCTTCCTGACTACGTCGAATACCAATATGTTCCTGCCCCATCTTTTCGTTCTTTATCTCCAATGGCAAGTGATGATGCTTTAGATCTGTTGTCAAAGATGTTTACCTATGATCCAAGTGCTAGAATTTCAGCTGTGCAGGCATTAGAGCACAGGTACTTCTCCTCAGCACCTCTGCCCGCAGAACCATGCAAGCTTCCTAGACCTGCCCCTAAAAAGGAATCTAGGGCTTCTGATTTCAATCCACATGAGGGTCCCACTGTGCTATCACCGCCAAGAAAGTCCCGGAGAGTGATGCCAGGACGTGATGGGCTTGAAGAAAATTCACTGCGAGGAGACAATGTTGGCTACTTCAGGCAGACTGCTGGTGATACTACAGGCAAAGAATGA 1011 0.4392 MGSKTNVKMINKKISDLDSSKKVADRYLKREVLGEGQTVAIKKIRLGMQKEGVNFTALREIKTLKELKDPNIIEFIDAFPHKGNLHLVFEFTETDLEAVTRDRNIFLSPADIKSYLQMTLQDFGLARIFGSPDGRFTHQVFAWWYRAPVLFGTKQYGSGVDVWAAACIFAELLFRRPFLQGSSDTDQLGKIFAAFGTPTPSLWPDMVYLPDYVEYQYVPAPSFRSLSPMASDDALDLLSKMFTYDPSARISAVQALEHRYFSSAPLPAEPCKLPRPAPKKESRASDFNPHEGPTVLSPPRKSRRVMPGRDGLEENSLRGDNVGYFRQTAGDTTGKE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0086 336 SUPERFAMILY Protein kinase-like (PK-like) 23 267 IPR011009 -
Lele19g0086 336 MobiDBLite consensus disorder prediction 270 336 - -
Lele19g0086 336 Pfam Protein kinase domain 103 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0086 336 ProSiteProfiles Protein kinase domain profile. 1 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0086 336 Gene3D Transferase(Phosphotransferase) domain 1 94 277 - -
Lele19g0086 336 PANTHER CELL DIVISION PROTEIN KINASE 31 121 - -
Lele19g0086 336 Gene3D Phosphorylase Kinase; domain 1 29 92 - -
Lele19g0086 336 SMART serkin_6 27 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0086 Lele-ChrLele19 577235 581189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0086 18 309 Core Cell Cycle Gene Families AT1G18040 66.272 5.87e-152 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Lele19g0086 Pkinase 2.2e-22 CL0016