Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0074 ATGGCGATCTTCTCCTGTATATCTCAGTGTTTCTTACCCAGTGTAAATGAAAACGATGCTTCGATCCCTAAGAATTGTGAGGTGAAGGGTAGTCAAATAGTGAGTGTGACTGTTGAGGTAACAAGCAACCGTTGTGGCCCTGTCCAATCGGTGCCTGTGGTTTCTGGAGCACCGATCAGCCATGTTCGATCTGAGGTACTGAGCAGCCACGGCAACGGAACTAAAATACTCAAGTATTCTGAACTTAAAATATCAACCAACAATTTTGAACCCGACAGAGAGCTCGGGAGAGGAAAACATGGGACAGTATACCTTGGAATTCTTGAAGATGGGCATTCTGTTGCAATAAAGCAGTTACATGAAGACAAGCTCAAGGCCCTGAGGTTACATGATGAGAAGCTCCACAGCGAGAAACTCGAAAAGTTCATGAGTGAAGTTTCATTGTTAACTTCTGTGAGCCATGAAAACCTTGTTCAACTATATGGCTGCATCTCTTCTCAAAGCAGTGAACTACTTCTAGTGCAAGAATACATGTCCAAAGGAAATCTTGCTAAATGTCTTCTTGATTCCCTGCGGCAACCTGGCACATTCCCCTGGCATCCCCGATTAAATATTGCAGTACAAACAGCAAGTGCATTGGCCTATCTCCATTCTTGTAATATAATACACCGTGATGTGAAAACCAGCAATGTTCTGCTTGACCAAAGTTTCAATGCTAAAGTTGCCGACTATGGATTGTCACACGTTTTCCCACTGGGTGTTACCCATATCACAACTGATCCTGATGGGACTCCTGGTTATATCGATCCAGAGTATTACGAGCATTGCCATCTTTCTGATAAGAGCGATGTATATAGCTATGGAGTAGTGCTGATTGAGCTGATATCATCCCTGCCAGCATTTGGTGAGGAAGATGAACATCCCTGCCTTTCTGATTATGCCGTCAATAAAATCCGTGGCAGACAACTAGGAAGCCTTGTAGATCCTGCTCTTGGATTTGAATCAGACGACTGGATAACTCAGACGATTAGTGCAGTGGCAGAGTTGGCATGTAGCTGTTTGCAACGCCAGAGAGACAGGAGACCTTCCATGGCTCAAGTGTTGGATAGGATTAAGAGCATTAAAAGTACGAGAACGGGGAATTCTCTTTCCTGGCCTCCAAATAGTTTGTAA 1173 0.4408 MAIFSCISQCFLPSVNENDASIPKNCEVKGSQIVSVTVEVTSNRCGPVQSVPVVSGAPISHVRSEVLSSHGNGTKILKYSELKISTNNFEPDRELGRGKHGTVYLGILEDGHSVAIKQLHEDKLKALRLHDEKLHSEKLEKFMSEVSLLTSVSHENLVQLYGCISSQSSELLLVQEYMSKGNLAKCLLDSLRQPGTFPWHPRLNIAVQTASALAYLHSCNIIHRDVKTSNVLLDQSFNAKVADYGLSHVFPLGVTHITTDPDGTPGYIDPEYYEHCHLSDKSDVYSYGVVLIELISSLPAFGEEDEHPCLSDYAVNKIRGRQLGSLVDPALGFESDDWITQTISAVAELACSCLQRQRDRRPSMAQVLDRIKSIKSTRTGNSLSWPPNSL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0074 390 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0074 390 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 68 378 IPR044652 GO:0004672
Lele19g0074 390 SMART serkin_6 89 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0074 390 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Lele19g0074 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lele19g0074 390 Gene3D Phosphorylase Kinase; domain 1 61 177 - -
Lele19g0074 390 SUPERFAMILY Protein kinase-like (PK-like) 73 372 IPR011009 -
Lele19g0074 390 Gene3D Transferase(Phosphotransferase) domain 1 178 383 - -
Lele19g0074 390 Pfam Protein kinase domain 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0074 Lele-ChrLele19 536123 538089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0074 76 376 Receptor kinase-like Gene Family AT1G25390 47.883 4.13e-90 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele19g0074 Pkinase 1.7e-48 CL0016