Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0067 ATGTGTTTTGTGTTTAGATTATGCCCCTGCTTCAACAAGAGGTTCAAGGCCAATGCTGCCTCTGATTCCCATCGTCCTCAAGCAGCCGACGGTGTTGCCAATACGTGGGACCTCTTCTTCGACCTCCCCACTCTGCATGTTGCCACCAACTTCTTCTCCGAGCTGAACCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGATTGATGCCAAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTTTGGAGTCAAGACAAGGAATTAGAGAATTTACCAATGAGGTCAAACTACTACTGAGAATTCAGCACAAGAACTTGGTTACGTTATATGGGTGTTGTGCTGATGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTTGATAAAAGAAAGTCACTATCTCTGGACTGGGCTACACGATTTAGAATAGTTACAGGTGTGGCGAGAGGACTTCTGTACCTGCATGAAGAGTCCCCAATAAGAATTATTCATAGAGACATCAAAGCCAGCAACATTTTGCTGGATGAGAAGTTAAATGCAAAAATTTCAGACTTTGGCCTAGCAAGACTATTTCCCGGGGATGACACTCATGTGCAAACATTTAAGATTTCTGGTACACATGGTTATATGGTTCCGGAATATGCAATGCGTGGATATTTGTCTATGAAGACAGATGTTTTTAGTTATGGAGTCTTGGTATTAGAAATTGTTAGTGGGAGAAAAAACTATGATGGGCTACTTGGTGAAGAGGAGGCAGATCTGTTGAACCATTCATGGAAGCTATATCAGGCGGGGAAGAGAATGGATTTGATTGACACGAGCCTGGCCAAATACAACGTTGACAAGGCTGCGATGTGCATTCAGCTGGGCTTGTTGTGTTGCCAAGCAAGCATATCAGAAAGACCTGATATGAATGCCGTTCATCTGATGCTCTCAAGTGACTCGTTCATTTTGCCAGGACCTGGTAAACCGGGAATTCAAGGCCGTGTAGGACGTTGGACTACGACCTCAACCTCTGCTTTAACCAACGCTGCTACTGGTGCAACCAAGGCTTCCCTGGGAAGTAGTATAGTTGAGGACTACTCTAGAAATTCTATCTCCACTTCTTCGTTCGAGGAAGGAAGATGA 1161 0.4393 MCFVFRLCPCFNKRFKANAASDSHRPQAADGVANTWDLFFDLPTLHVATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSLESRQGIREFTNEVKLLLRIQHKNLVTLYGCCADGPEKMLVYEYLPNKSLDHFLFDKRKSLSLDWATRFRIVTGVARGLLYLHEESPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPGDDTHVQTFKISGTHGYMVPEYAMRGYLSMKTDVFSYGVLVLEIVSGRKNYDGLLGEEEADLLNHSWKLYQAGKRMDLIDTSLAKYNVDKAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFILPGPGKPGIQGRVGRWTTTSTSALTNAATGATKASLGSSIVEDYSRNSISTSSFEEGR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0067 386 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Lele19g0067 386 SUPERFAMILY Protein kinase-like (PK-like) 36 322 IPR011009 -
Lele19g0067 386 SMART serkin_6 52 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0067 386 Gene3D Phosphorylase Kinase; domain 1 14 127 - -
Lele19g0067 386 ProSiteProfiles Protein kinase domain profile. 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0067 386 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Lele19g0067 386 CDD STKc_IRAK 58 322 - -
Lele19g0067 386 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 34 351 - -
Lele19g0067 386 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 27 127 - -
Lele19g0067 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lele19g0067 386 FunFam Cysteine-rich receptor-like protein kinase 41 128 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0067 Lele-ChrLele19 485105 487180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0067 28 337 Receptor kinase-like Gene Family AT4G21410 52.866 1.67e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele19g0067 PK_Tyr_Ser-Thr 5.7e-47 CL0016