Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0060 ATGGAGGAAAGCCTACCACCTGGGTTCAGATTCCATCCGACAGATGAAGAGCTCATCACATATTATCTGACAAGGAAGGTGTGCGATACGAGCTTCACATGCAAGGCTGTAGCAGTCGTTGATCTCAACAAGAACGAACCTTGGGATCTTCCAGGGGCCCTTGGTGTGGGTATCAATATTCTTAGATTATTGGATAAGTTTTGGAAGGAAGAATGGGTGGTGTGCAGGGTGTTCCAGAAAAGCTCATCAGCGGCAAAGAAAACACAACAGACGTCATCCTCTCAACTATCTCTGGACTCTCCTCCTCATCATGATACCTCTTTGCTCAATGAATTCGGTGACGTTGACCTCCTAAATTTAAAGACCATCACTCCAAATTCATCAACCGGCTTAACCGCCATGTCCTCTCAGATTTACAATAATAGCCATGTTAATACGAATATGAACTTAACCATGAACTGGTCACCTGCATCTGATCAACAGCAGCTTCCCTCTCTTCCCTCCCTCCCATGGCCTTCTGGCTTGCTCAATCCAAGCCTTTCTGTGAATTCCTTGCTTCTTAAGGCATTACAGCTTCGCATTTGTCAACAAAGAGAAATTGCAATGACGTCGGATCATTTTGCTTCATACCTGCCACCTCAAGGAGTTTCTCAAGCAATGGGGACTGATGATCTCAGAATGGATGCTTCTTCCTCATCAAAGGTTTTAGATATGACACAGCAACAGCAGCAACAATTCAATCAGGACTCCATTTGGTGA 759 0.448 MEESLPPGFRFHPTDEELITYYLTRKVCDTSFTCKAVAVVDLNKNEPWDLPGALGVGINILRLLDKFWKEEWVVCRVFQKSSSAAKKTQQTSSSQLSLDSPPHHDTSLLNEFGDVDLLNLKTITPNSSTGLTAMSSQIYNNSHVNTNMNLTMNWSPASDQQQLPSLPSLPWPSGLLNPSLSVNSLLLKALQLRICQQREIAMTSDHFASYLPPQGVSQAMGTDDLRMDASSSSKVLDMTQQQQQQFNQDSIW 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0060 252 Pfam No apical meristem (NAM) protein 6 55 IPR003441 GO:0003677|GO:0006355
Lele19g0060 252 Gene3D NAC domain 14 68 IPR036093 GO:0003677|GO:0006355
Lele19g0060 252 ProSiteProfiles NAC domain profile. 5 162 IPR003441 GO:0003677|GO:0006355
Lele19g0060 252 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 53 - -
Lele19g0060 252 MobiDBLite consensus disorder prediction 230 252 - -
Lele19g0060 252 SUPERFAMILY NAC domain 3 80 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0060 Lele-ChrLele19 448127 450063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0060 1 57 NAC Transcription Factor Family AT3G18400 73.684 2.66e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele19g0060 NAM 6.4e-14 No_clan