Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0040 ATGGTTTCGAGGGGGGTTTTCCTGATGCTGATGGTGTGCCTTGTCTTGTTTGGCTTGCATTGCCACTCCAATAATGAGGAAGCGCATGATTATAAGGAAGCCAAAGCCAAGACCATGAAAACGGGGGAGAAGGCGGCTGAGACCGCTAAAGAGGGCAAAGAAGCCACAGAGTCATGGACTGAGTGGGCTAAAGACAAAATCACCGGAGGCATTGGCTTCAAGCATGATGATCTCTCTAACAAAGTTTCTCATCATGCCACCGACACTGCACACAGGACCAAAGATTACGCTGACGAGGCTGCTCACAAGACCAAAGATTACGCCGGCAACGCTGCTCAGAAGACCAGAGATTACGCCGGCGACGCTGCTCAGAAGACCAGAGATTACGCCGGCGACACTACTCAGAAGACCAAGGAATACGCGGGCGACGCTGCTCAGAAGACCAGAGATTACGCCGGCGACACTACGCAGAAGACCAAGGAATACGCGGGCGACGCTGCTCAAAAGGCCAAAGAATACGCCGGAGATGCTACTCAGAAGGCCAAAGAATACGCCGGCGATGCTGCTCAGAAGACCAAGGAATACGCAGGTGGTGGTGCTCAGAAGACAAAAGAATATACTGGGGATGCTGCTGAGAAGGCCAAAGATTATGCCGATGATGTTTCAGACAAGACCAAAGGTTATGCCAGCGGTGCTGCACAGAAGACCAAGCAATATGGCTCTGACGCTGCTCAAAAAACCAAGGACGTCGCTTCTGGGGCAGGTCAGTACGTGAAAGATGCGGCAACAGAGAGGATGAAGAGCATGAAGGACGCCGCCGCGGAGAAGGCGAGTGACATTGCCAGCACAGCGAAAGAGAAAGCCCAACACATTAAGAAGGTAGCGACGGGCACTGCGGATTCTGCAAAAGACAAGGCCAGTTCAGCGTCTGAGAAGGCGCAAGAGGCAGCTAATAAATCATCGGAGAGAATGAACGAGGCGAAGGGAAAAGCATACGAGATGGCACAAGAGGCAAAGGGAAGAGCGTGGGAGGGGGCAGAGGAAGCGAAGGAGGAGGCGAGGGAGAAGGGAGAGAGGACGATGGAGGAGAGCAGGGAGGGGCAGGCGAAGACGGAGGAGAATCTGAATCTGGCAAAGGAGAAATCAAAAGAGGGTTACGAGACCGCCAAGGACAAGGCAGGGGAGGCCATCGAGTACACAAAGGACGCCATTGCCTCCAACTATGGGGCTGCCAAGAAGAAGTCGCAGCAACTCAAGGATGAATTTGGCGGGAAGGGCCGGGACGCTGAGCTGTTAGCTGCTCTGTGGGTGTCCGTTTCAGTGTTGAGAACTGACTCAGCCGCAACCAGTTTGTTGTTGCCATCAGAAGCAGGCCACAACACAATCACAATGGTCATCTTGAGACTTGGCAACTCCCGCACGGAGAATGATGAAGGAGTGAGGCTTGCCAATTACGAAATTGATACAACTCTTGGCACTGGCAGTTTCGGAAAGGTGAAATTGGCCAAACATATCCATTCTCATAAACTCTTTGCTCTCAAGATCATCGACAAGACCCACATCACCCGCCTCAATATTGCCCATCAGGTTTTGGCTAGCAAAACGAAACTTTACATGGTCTTGGAGTACGTCACTGGAGGAGAATTGTTTGACAGAATTCTGGAGAACGTACTAGTGGATGCCCAACGCAAGATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGATATCTAAAGGAGATGTCCAGATACCCAAATGGCTATCGCCTGGTGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTCGCCAGTATCAAAGAAGATGAATGGTTCAAGCAGGACAATGTTCCAGCAAATACTGGGGACGAAGAGGAGGAAGATAAAGAGCATGTGTCTATCGATGAAGCCTTTTCAATCCATGAAGTGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAACCATTCAGCAAGAGATCTGACGCAAAGATTGAAGATATTGGAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAAGTTAGTATTACCGCCTATTTTTGGAATTTGA 2163 0.5025 MVSRGVFLMLMVCLVLFGLHCHSNNEEAHDYKEAKAKTMKTGEKAAETAKEGKEATESWTEWAKDKITGGIGFKHDDLSNKVSHHATDTAHRTKDYADEAAHKTKDYAGNAAQKTRDYAGDAAQKTRDYAGDTTQKTKEYAGDAAQKTRDYAGDTTQKTKEYAGDAAQKAKEYAGDATQKAKEYAGDAAQKTKEYAGGGAQKTKEYTGDAAEKAKDYADDVSDKTKGYASGAAQKTKQYGSDAAQKTKDVASGAGQYVKDAATERMKSMKDAAAEKASDIASTAKEKAQHIKKVATGTADSAKDKASSASEKAQEAANKSSERMNEAKGKAYEMAQEAKGRAWEGAEEAKEEAREKGERTMEESREGQAKTEENLNLAKEKSKEGYETAKDKAGEAIEYTKDAIASNYGAAKKKSQQLKDEFGGKGRDAELLAALWVSVSVLRTDSAATSLLLPSEAGHNTITMVILRLGNSRTENDEGVRLANYEIDTTLGTGSFGKVKLAKHIHSHKLFALKIIDKTHITRLNIAHQVLASKTKLYMVLEYVTGGELFDRILENVLVDAQRKIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEISKGDVQIPKWLSPGAQNLLRRILDPNPLTRITLASIKEDEWFKQDNVPANTGDEEEEDKEHVSIDEAFSIHEVDVSERKMRFTSNHSARDLTQRLKILEQKWDLESRRKMEKLVLPPIFGI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0040 720 Gene3D Helix hairpin bin 123 200 - -
Lele19g0040 720 Gene3D Helix hairpin bin 213 344 - -
Lele19g0040 720 MobiDBLite consensus disorder prediction 222 254 - -
Lele19g0040 720 Coils Coil 361 381 - -
Lele19g0040 720 Gene3D Helix hairpin bin 29 122 - -
Lele19g0040 720 Gene3D Transferase(Phosphotransferase) domain 1 555 601 - -
Lele19g0040 720 Gene3D Transferase(Phosphotransferase) domain 1 602 713 - -
Lele19g0040 720 Gene3D Transferase(Phosphotransferase) domain 1 476 554 - -
Lele19g0040 720 Coils Coil 299 330 - -
Lele19g0040 720 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 479 599 - -
Lele19g0040 720 MobiDBLite consensus disorder prediction 269 387 - -
Lele19g0040 720 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Lele19g0040 720 SUPERFAMILY Protein kinase-like (PK-like) 482 649 IPR011009 -
Lele19g0040 720 SMART serkin_6 485 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0040 720 MobiDBLite consensus disorder prediction 229 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0040 Lele-ChrLele19 271176 276383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0040 526 695 CBL-interacting serine-threonine protein kinases AT3G17510 38.078 2.04e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele19g0040 None None None