Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0013 ATGGGTCTCTCCGGCAATAACTTCTCCGGCGACATACCTAACTCTTTGGCCAAGCTCCCCTTGCTCGTAGAGTTGAGCCTTGAGGACAATGAATTCTCTGGAGCCATTCCGTCTTTCAGTCAATACTTTCGATTGTTCAATGTTTCCAACAATCGTTTGGAGGGACCCATCCCTAATGAATTGGCTAGGTTCGGTGCAACATCCTTCTCTGGAAACCCAGGATTATGTGGGAAAGCAGTGGAGAAGGAGTGCACGGAGGGCGGGCAGCAACAGGAGCAACAAGAAGCAACGACCGAGGAGAAACAAAGTAGTAATTTGGTGAGAGTGGTAACTATGGTTATAATGGTTTTAATGGTCGTGATGTTGATATTTGTATTGATAAAGACGGCAAGGAGAAGGAAGGGGAACAAAAATATGGGGGTGAGAAAAGACGGGGAAGGGGAAGAGGTGGTGCAAGTACATGTGCCCAGCTCGAACCACAGTAAGACATCAGAATCAACGAAGAAAGGCTCGAATTCGGTTCCGAAAAGGAATGCCATAGGGGACTTGGTGATGGTTAACGAGGAGAAGGGCGTTTTTGGGTTGCCTGATATGATGAAGGCTGCTGCCGAGGTGTTGGGGAACGGCGGCGTGGGCTCTTCTTACAAGGCCAGCATGGGCAATGGATTGTCGGTAGTGGTCAAGAGGATGAGGGAGATCAACAAGATCAGTAGAGATTCCTTCGATGCTGAGATGAGACAATTTGGCAGAATCAGACACCCTAATGTTCTCACCCCTTTGGCCTACCACTATCGCAAGGAGGAGAAGCTCATTGTGTCTCAATACATTCCCAAAGGCAGTTTGTTGTATGTCTTGCACGGGGATAGAGGAGCATGCCATGGCGACCTCAACTGGCCCACTAGGTTGAAGATTGTAAAGGGAATCGCGAGCGGCTTAAGTTTCCTGCATTCTCAATTCGGATCCCATGATCTGCCCCACGGGAACCTCAAGTCCAGCAATATTCTTTTGAGTGATGCATACGAGCCACTCCTCAACGACTTCGCCTTTCATCCGCTTATCAATCCAGACAATGCTCCCCAGGTGCTGTTTGCCTACAAAACTCCAGATTACATACAGTACCAGCAAGTGTCTCGTAGAACCGATGTCTATTGCTTCGGAATTATCATCCTGGAAATCATGACTGGCAAATTCCCTTCTCAGTATCATAGCAACAAGGGCGGCACCGATGTTGTGCAGTGGGTGCTGACAGCCATTGCTGAAGGCAGAGAAGCCGAATTGATAGATCCTGATATTCAAACTAACAACACCGATTCCCTCAATCACATGCTGCAGCTTCTCCATATCGGGGTTAGTTTCACCGAATCCAATCATCAACAACGACTTAACTTAGTGGAAGCCATTAGAAGGATAGAGGAGGTTCTAGTCTAA 1428 0.479 MGLSGNNFSGDIPNSLAKLPLLVELSLEDNEFSGAIPSFSQYFRLFNVSNNRLEGPIPNELARFGATSFSGNPGLCGKAVEKECTEGGQQQEQQEATTEEKQSSNLVRVVTMVIMVLMVVMLIFVLIKTARRRKGNKNMGVRKDGEGEEVVQVHVPSSNHSKTSESTKKGSNSVPKRNAIGDLVMVNEEKGVFGLPDMMKAAAEVLGNGGVGSSYKASMGNGLSVVVKRMREINKISRDSFDAEMRQFGRIRHPNVLTPLAYHYRKEEKLIVSQYIPKGSLLYVLHGDRGACHGDLNWPTRLKIVKGIASGLSFLHSQFGSHDLPHGNLKSSNILLSDAYEPLLNDFAFHPLINPDNAPQVLFAYKTPDYIQYQQVSRRTDVYCFGIIILEIMTGKFPSQYHSNKGGTDVVQWVLTAIAEGREAELIDPDIQTNNTDSLNHMLQLLHIGVSFTESNHQQRLNLVEAIRRIEEVLV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0013 475 MobiDBLite consensus disorder prediction 154 176 - -
Lele19g0013 475 ProSiteProfiles Protein kinase domain profile. 200 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0013 475 SUPERFAMILY L domain-like 3 64 - -
Lele19g0013 475 Pfam Protein kinase domain 204 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0013 475 MobiDBLite consensus disorder prediction 154 174 - -
Lele19g0013 475 SUPERFAMILY Protein kinase-like (PK-like) 204 469 IPR011009 -
Lele19g0013 475 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 473 - -
Lele19g0013 475 Gene3D Transferase(Phosphotransferase) domain 1 276 475 - -
Lele19g0013 475 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Lele19g0013 475 Gene3D Phosphorylase Kinase; domain 1 199 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0013 Lele-ChrLele19 113069 114496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0013 3 473 Receptor kinase-like Gene Family AT3G42880 49.696 2.30e-168 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele19g0013 Pkinase 7.8e-25 CL0016