Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1392 ATGAGACTCAAAGATCTTCATCTCAAGCTCAAGGCATTAATGCTAAAGAGACTAGTGTGGGGGTTTAATGGAGGCAAGAGGAGGAGGATAAAGAAGAATCCGTCATGGATGAATCCGGTGTCACATGGGTGTCACGTGATCGATCGGCGCATAATCAGAGGGTATTGTTCCGATGACTATGAGTGTGATTCAGTTGTGGTACAGAGAGAACAGAATGAAAACACAGAACTTTGGTATTTCGGAATATTTGATGCTCTAATTGGAGATGGCGTCACCAAGTATATACAATCACATTTATTTCAGAAACAGCTTAAAGAGGTAAGTGGAAGGCAGTCTAGAAGCTCATCAGAACTTGTGAGAGCTGAAAGGATCGATTCTGATACTGAATTTTTGATCTTAGCCACCGATGGCATATGGGACGTGATGAAGAATCAAGAGGCAGTGAATCTCATAAGGCACATAGAGAATCCCAACGAAGCTGCTAAATGCTTGGCTAATGAAGCTTTGAACAGATTGAGCAAAAGCAACATCGCGTGCATCATTATTCGATTCGACTAA 558 0.4194 MRLKDLHLKLKALMLKRLVWGFNGGKRRRIKKNPSWMNPVSHGCHVIDRRIIRGYCSDDYECDSVVVQREQNENTELWYFGIFDALIGDGVTKYIQSHLFQKQLKEVSGRQSRSSSELVRAERIDSDTEFLILATDGIWDVMKNQEAVNLIRHIENPNEAAKCLANEALNRLSKSNIACIIIRFD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1392 185 Pfam Protein phosphatase 2C 122 177 IPR001932 -
Lele18g1392 185 ProSiteProfiles PPM-type phosphatase domain profile. 1 184 IPR001932 -
Lele18g1392 185 PANTHER PROTEIN PHOSPHATASE 119 184 - -
Lele18g1392 185 SUPERFAMILY PP2C-like 122 185 IPR036457 -
Lele18g1392 185 Gene3D - 111 185 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1392 Lele-ChrLele18 19915545 19917772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1392 92 184 PP2C-type Phosphatase Gene Family AT3G23360 55.789 7.64e-30 108