Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele18g1376 | ATGGTCATCAACGGCGAAAAGCTCGTGACAGCCCAAATCGGACATTGCAAGGCTGTTGTGTGCAGAGATGGGATTGCTTATCACACAAATCCCACTTCCCAACACTTACACAAAGCCCCCCATTGGACTCGCAAACTCTTTTCAGGTGGAAGGCAGTCTAGAAGCTCATCAGAACTTGTGAGAGCTGAAAGGATCGATTCTGATACTGAATTTTTGATCTTAGCCACCGATGGCATATGGGACGTGATGAAGAATCAAGAGGCGGTGAATCTCATAAGGCACATAGAGAATCCCAACGAAGCTGCTAAATGCTTGGCTAATGAAGCTTTGAACAGATTGAGCAAAAGCAACATCTCGTGCATCATTATTCGATTCGACTAA | 381 | 0.4514 | MVINGEKLVTAQIGHCKAVVCRDGIAYHTNPTSQHLHKAPHWTRKLFSGGRQSRSSSELVRAERIDSDTEFLILATDGIWDVMKNQEAVNLIRHIENPNEAAKCLANEALNRLSKSNISCIIIRFD | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele18g1376 | 126 | Gene3D | - | 1 | 126 | IPR036457 | - | |
| Lele18g1376 | 126 | PANTHER | PROTEIN PHOSPHATASE | 60 | 125 | - | - | |
| Lele18g1376 | 126 | CDD | PP2Cc | 1 | 125 | IPR001932 | - | |
| Lele18g1376 | 126 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 125 | IPR001932 | - | |
| Lele18g1376 | 126 | Pfam | Protein phosphatase 2C | 64 | 118 | IPR001932 | - | |
| Lele18g1376 | 126 | SUPERFAMILY | PP2C-like | 2 | 126 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele18g1376 | Lele-ChrLele18 | 17601601 | 17602218 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele18g1376 | 1 | 125 | PP2C-type Phosphatase Gene Family | AT3G23360 | 51.880 | 3.26e-41 | 135 |