Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1352 ATGAGAAACATCCCAGAACGTGAACGCGAAATCGCCGGTACTAGCAGAGGCAAAGGCACCGATCGTCTCCGAGCTGTAAAGGCCGAACGGGTAAGGGATGCTCAAGTCGACGACGCTGGTCATGAGTCGAGCCAGGAGAACGAGCAGTACTCAGCGAGTCGTAGGACGATTCGCTCTCGGTACTTGGCGCTTATGAATTTAATAAATGAGAAAAGGGATGATTTGGTTAATACAGACTTGGAAAAGTTTGATACCATCATGGAGGAAGTAGAGAGGTTACATGAGCACGTTCATAACCCACGAGAGCAAGTTGCAGATGCTGAGGCGCTTCTTGACTTGGCTACCACTTTGGTCGGTTCTGTAAAGTCTCTGCTTAGTGAAGGTGTAACCCCTTCTGAGTTTGTTAGCTGCATGATTAATGAGTTTGGACAATCCAATAGGGGTTTCAGCTGCGAAGAGAATCCCCAAAACTCAATTAACTGGAAAGAAGTTGGATTGAAAGTATCGCCAATTTTCATGAAGGTTTATGGCTGTTGTACCATGCTTGGTCCGATGGAAAATGAGTTGAAACAACGGAAGGTATTACAAAGAAAACGCACTAGGCCAACAACTGCTATGGCTAGGCCAGAAGAGATTGATGATGCAGCAGGAGAGGATAAAACTGATACAGATAAGAATATGGCAACAATGTTTGAGATATTGAGGAAGAAGAAACGTGTTAGGCTAGAAAGCCTGATGTTGAATAGGAAATCATTTGCTCAGACAGTGGAAAACTTGTTTGCTCTATCATTCTTAGTTAAAGATGGCCGTGCAGAAATATCTATGGATAAGAATGGTTCTCACTTTGTCTCACCAAGAAATGCTCCAGCATCCAACTCAGTTATGTCAAAAGAAGTTTCTTACAGCCATTTTGTGTTCAGATATGATTTTGAAGATTGGAAGCTAATGAAGGACAAGGTGCCTGAGGGAGAGGAGCTAATGCCTGATAGGACTCAATTCTGCAGAGTGATGGCCAGTCAAGTAGAGACTACTGCATGCAATTCCCAGCCCCCATTGGTAACAACACCGATCAGGAAGCTAACCCGAAACCGAGGGCGTGTTGTGCAGGAAGATGTGGTGGAAGAAACTCCTGAATGTAATGAGGAAAATGCTTCCAGAGCTACTGCAATTCGTGGATGCAGGCTTAAGCTTACTTAA 1197 0.4436 MRNIPEREREIAGTSRGKGTDRLRAVKAERVRDAQVDDAGHESSQENEQYSASRRTIRSRYLALMNLINEKRDDLVNTDLEKFDTIMEEVERLHEHVHNPREQVADAEALLDLATTLVGSVKSLLSEGVTPSEFVSCMINEFGQSNRGFSCEENPQNSINWKEVGLKVSPIFMKVYGCCTMLGPMENELKQRKVLQRKRTRPTTAMARPEEIDDAAGEDKTDTDKNMATMFEILRKKKRVRLESLMLNRKSFAQTVENLFALSFLVKDGRAEISMDKNGSHFVSPRNAPASNSVMSKEVSYSHFVFRYDFEDWKLMKDKVPEGEELMPDRTQFCRVMASQVETTACNSQPPLVTTPIRKLTRNRGRVVQEDVVEETPECNEENASRATAIRGCRLKLT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1352 398 Pfam Nse4 C-terminal 240 326 IPR014854 -
Lele18g1352 398 MobiDBLite consensus disorder prediction 1 44 - -
Lele18g1352 398 MobiDBLite consensus disorder prediction 1 52 - -
Lele18g1352 398 PANTHER UNCHARACTERIZED 11 382 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1352 Lele-ChrLele18 13334261 13339897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1352 1 398 Non-SMC Element family AT1G51130 50.860 5.10e-129 375