Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1346 ATGTCATCGTCGGCGAACCCACCGTGCTCGGCTTGCAAGATGCAGAGGAGGAAATGCACGCCGGGATGTGTATTTGCGCCATATTTCCCGGCGGACAATCCTCGGAAGTTTGCTTCCGTGCATAAGGTTTTTGGGGCCAGTAATGTGGCCAAGATTCTGAACGATGTTAGCGTGGCGCAGCGGGAGGACACTGTCAGATCATTGGCTTATGAGGCGGAGGCCCGCCTCAGGGACCCGGTATACGGCTGCGTCGGCATCATCTCTGTCCTCCAGCACCGGCTGAATCAGCTGCAAAGTGAACTCACCAACGCCAGAAAAGAACTCGCTGCCTATATTGGTCAACGGGCCTTGCTTCCCAACCACTTGGTGGAATACAATAGGCAAGAGGTTTTGACTTTCAATGTCGGCGGTAGTGGCGGCGGCGGCCGAGTCGACCATGGCAGCAGATACCCACTGGACGGAACCCTTGTTTCTCATCAGGTTGAATCACATCATCAGGTTGAGGTGCAATCTCAGCAATGGACGTTGTCACAGAAAAGGGAGGCAAGTAGAGCTGTGGGTCCATATACCCGTGCATTATATGGAATCTGA 591 0.5398 MSSSANPPCSACKMQRRKCTPGCVFAPYFPADNPRKFASVHKVFGASNVAKILNDVSVAQREDTVRSLAYEAEARLRDPVYGCVGIISVLQHRLNQLQSELTNARKELAAYIGQRALLPNHLVEYNRQEVLTFNVGGSGGGGRVDHGSRYPLDGTLVSHQVESHHQVEVQSQQWTLSQKREASRAVGPYTRALYGI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1346 196 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Lele18g1346 196 Coils Coil 87 114 - -
Lele18g1346 196 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lele18g1346 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1346 Lele-ChrLele18 12970220 12970810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1346 1 119 AS2 family AT5G66870 69.748 8.41e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele18g1346 LOB 1.6e-41 No_clan