Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1311 ATGGCAGAGCCGCTTGGTGCCATTGATGCACATGGCCTTGCATCGGCCATTGCCGAGCAATCAGACCACCAGAGTGTGCTCTTGGGCATCTTCCTTGAAGACAAACTCTCTCTTCTCATTGTCTTCTTGGAAGAGCGTACTCCTAGCCGTTCTTTCCCCTCTTTTTGTTCTTCCTTTTGTCGCAGAAATGCCCTAGGTTTCAGTTCTCAAATAGGGCTTTTTGTTCTCTCTCTAATCCTCGCTTCAACCCCTGCGGAGTTGGAAACTTCACCACATAAGAGATTGTTTTCAGAGATGGAGTCTCTTGGTTTTGTGGATGACCTCCTGAATTTCTCATCTGACGTAGGTGAAGAAGATGACGAGGAAGATAAACCCAGGAAAGCCGTGTCTTCTCTTAGCCTTAAATGTAGTGATGCAGCATCATTAAATGCTTTGGACGCAGATGACCCAACCCGTTCATATTCTGAGTTTGCAGAAGAAGAGCTTGAATGGCTATCCAATAAAGATGCTTTCCCAGCTCTCGAAACATTTGCTGACATGCTCTCTATTCAACCAAACTTATCGAAGCCCCAAACCCCGGTCTCAACCCTTGAATACAGTGCAAGTAGTATCAGCAGTAATAATGGTGCTAACAATGTTACCCTCTTGAATGGCTTTAATCACGTTAAGGTTCCTGTTCGAGCACGAAGCAAGCGTCATAATAGGCAACCCCATGGTGTTGCTGACATATCCGGTCGGCAGTTTTGGTGGAACCAGCCGAGTAACACTATTACCAAACCAGAAGCAATGATAACTGTCTCAGTAATAGGGAGGAAGTGCCAGCACTGTGGAGCAGAAAAAACTCCACAGTGGCGGGCAGGACCCCTTGGACCAAAAACCCTTTGCAATGCATGTGGGGTTAGGTATAAGTCCGGGCGACTTTTGCCAGAATACCGCCCAGCAAGTAGCCCTACATTTCGTTGTGAATTGCATTCAAATTCCCACAGGAAGGTAGTTGAGATGAGAAAGCAAAAACAAATGGAAAACCAGGGATGA 1035 0.4628 MAEPLGAIDAHGLASAIAEQSDHQSVLLGIFLEDKLSLLIVFLEERTPSRSFPSFCSSFCRRNALGFSSQIGLFVLSLILASTPAELETSPHKRLFSEMESLGFVDDLLNFSSDVGEEDDEEDKPRKAVSSLSLKCSDAASLNALDADDPTRSYSEFAEEELEWLSNKDAFPALETFADMLSIQPNLSKPQTPVSTLEYSASSISSNNGANNVTLLNGFNHVKVPVRARSKRHNRQPHGVADISGRQFWWNQPSNTITKPEAMITVSVIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFRCELHSNSHRKVVEMRKQKQMENQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1311 344 FunFam GATA transcription factor 264 344 - -
Lele18g1311 344 PANTHER GATA TRANSCRIPTION FACTOR 104 342 - -
Lele18g1311 344 ProSitePatterns GATA-type zinc finger domain. 273 298 IPR000679 GO:0006355|GO:0043565
Lele18g1311 344 CDD ZnF_GATA 272 321 IPR000679 GO:0006355|GO:0043565
Lele18g1311 344 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 270 330 - -
Lele18g1311 344 SMART GATA_3 267 317 IPR000679 GO:0006355|GO:0043565
Lele18g1311 344 ProSiteProfiles GATA-type zinc finger domain profile. 267 303 IPR000679 GO:0006355|GO:0043565
Lele18g1311 344 Pfam GATA zinc finger 273 307 IPR000679 GO:0006355|GO:0043565
Lele18g1311 344 Gene3D - 269 343 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1311 Lele-ChrLele18 10322037 10330629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1311 98 339 C2C2-Gata Transcription Factor Family AT3G24050 43.382 8.12e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele18g1311 GATA 1.8e-16 CL0167