Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1310 ATGTTGGCACAGTCCAATTCGTCAGCAAAACATTCTGTCAAAGCCAGACTAAAAGCACTTCTTACTGATGAGATGGCCAGAAAGAAGGGTCAGCATAAAAGTTCAACCTACCCTGTAAAGCCAAAACCACCAAAACAACCAATTTCTATTCCCAATTTAGATCATTCAGGTCCTAATCTTGCAATCGAAAATAATACCAAAATGGTCCCACACGCTACTGAGACATTCGAGGCTTTGTCACCAGCATGCTCAACAACTACCCATAAAGAGATCTGCGTAGAGTGTGGGACCGTGTTTTCTAGTGATTTAATGGAACATAATAGTATGGTTCATAAGCATCACAAACCACCATTAGAATATCACAGAGCATTGATGAAGGAAACATTGAGCTATGAAGAGAAGTCAATGCATGCCAAGTTGCTCACAACCGATGTGTCACCTTATCTCTTCAAGGATTTCTTGGATGCTCTTGATATGATAAATTCAAATAAGAATTTGATACTAAAATTTCTGCAGCATCAACATTCTCCTTTGGCATGCCACTTTCCTAACCAACAGGAATCAACAAGAAGAAAGATAAAACTGAATAAGTCTAGTTCATTTCCTGTACCTGGCTCGTCGTCATCATCTAAAGTTAAAAGACAAGACACAAACAAAATGGCAGATGATGAAATTCTCTTATCACGAGAGGTACAAAATGATAATCAAATGCAAAAGGCGATAATTTCTCAGTCTAAATCTTTGGGAAGAAGTGACCAGCAGCAGCCTATGTCATTGGACTCTTCTTATTATACATCGGTACCATCCAAGGTTCGAAATCCAAGGGCTATCAAGCGTTTCATGGATCTTAGACAGAAGGTGAAACATTTTATCGAAGAGAGCAAAAAGGAGAAACGCCGCATAGCGATGGATGCTGTGTATGACAAAGTTCCTCATGGAAATAAACCTCCCATTGACTTGAAGAGGAAGATTCCCAAAGTTCCCATAGACACTACTATTTCACCAAGTGAATGTGGCAGCTTTAGAAAGCGTCGAATGTCTCCAATGAGGACTTCATCTTTGAACGAATCAGTTTGGAAATATTCTCAGCTTTATGAGACTTGTTTTAACAAAAAAGCTAGGCACCCTAAATCCGAAAGGTTAAAGTTGAAAACAACAGAGGACAAAAATTCAATATTAAGGCCCCCAAAATCCTTTCAAAGGTTTCTTTCACTGCCTAATCTTAAAGATTACTTTTCTCAGAATGAGGAAGCTTCTTCTATTTTACCTCCACAGGTTCCAATTAGGAAATTTGCAGAGACAACAGCTAGTCCAAGCACTAGTGTAGGTAACATTACAACTCCAGAAAGTGTTTTAAAAAGTGTCCAAACAGGAATAGCCATCAGAAGTGATTCAGAGTTGGTATCAGATGATGAAGAAGACAAGGAGTCAAATCAAAATGAAAGTATAGGAATTGATGATTATTTTGGAAGATTAACAGACAGTGAAATGAATGACTCAACTTCTGTGGTTGCTGAAACAAAATCAATCTCCTTTTCTGGCTCCAGCTTCCTAGATGATTCAATTAGCTCTGATGAGAAGATATCTTTGGCAGAAGATTCCAAAATAAAGCCATGGCCAACAGATGGATTGGATCATCTGACAGAACAAGTACAAGAGCTTGACGTTGCAGATTATCATGAACTGGTGTTGAGTAGTGAAGATGATTTTCAGAAATTTGGAGCTCTGAACGAGAATTTGAACTTGGTGATTCCTGGCCTTGAAGTGAACAATAACAGTGAAGCTGAATTTAACTATGTGAAAGAAGTTTTAGAACTATCTGGATTATCCACAAGTCATGAATCTCTCAGCACATGGTTTTCCAATGAACAACCAGTTGATCCTACAGTTTATGATGAATTAGAAGGTTGCCTACTCTTTGATCCTCAAAGTTCTGGTAATGAAGAATCTGGTGGGGCCCATTGTAACCATTTGCTTTTGTTTGATTTGATTAATGAGGTTTTGATTGAGATTTTTGGGAGATCATATAGTTATTACCCAAAATCTTTGTCTTCTCTGTGTCATGTTTACCCAATACCAGTTGGAGACCAAGTTCTGAGAGAAGTGTGGACCCTTATTAATTGGTATCTGAACTTGAATTCAGAGTTATATCCATCTTTGGATTATTATGTTAGCAGAGATCTGGCAAGAAGTGATGGGTGGATGAATCTTCAGTTTGATTCTGAATGTGTGGGGCTTGGGCTTGATGACTTGATTTTTGATGATCTTTTGGATGAGATCATCTGCAATTGA 2292 0.3822 MLAQSNSSAKHSVKARLKALLTDEMARKKGQHKSSTYPVKPKPPKQPISIPNLDHSGPNLAIENNTKMVPHATETFEALSPACSTTTHKEICVECGTVFSSDLMEHNSMVHKHHKPPLEYHRALMKETLSYEEKSMHAKLLTTDVSPYLFKDFLDALDMINSNKNLILKFLQHQHSPLACHFPNQQESTRRKIKLNKSSSFPVPGSSSSSKVKRQDTNKMADDEILLSREVQNDNQMQKAIISQSKSLGRSDQQQPMSLDSSYYTSVPSKVRNPRAIKRFMDLRQKVKHFIEESKKEKRRIAMDAVYDKVPHGNKPPIDLKRKIPKVPIDTTISPSECGSFRKRRMSPMRTSSLNESVWKYSQLYETCFNKKARHPKSERLKLKTTEDKNSILRPPKSFQRFLSLPNLKDYFSQNEEASSILPPQVPIRKFAETTASPSTSVGNITTPESVLKSVQTGIAIRSDSELVSDDEEDKESNQNESIGIDDYFGRLTDSEMNDSTSVVAETKSISFSGSSFLDDSISSDEKISLAEDSKIKPWPTDGLDHLTEQVQELDVADYHELVLSSEDDFQKFGALNENLNLVIPGLEVNNNSEAEFNYVKEVLELSGLSTSHESLSTWFSNEQPVDPTVYDELEGCLLFDPQSSGNEESGGAHCNHLLLFDLINEVLIEIFGRSYSYYPKSLSSLCHVYPIPVGDQVLREVWTLINWYLNLNSELYPSLDYYVSRDLARSDGWMNLQFDSECVGLGLDDLIFDDLLDEIICN 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1310 763 MobiDBLite consensus disorder prediction 463 487 - -
Lele18g1310 763 MobiDBLite consensus disorder prediction 16 31 - -
Lele18g1310 763 MobiDBLite consensus disorder prediction 195 219 - -
Lele18g1310 763 MobiDBLite consensus disorder prediction 195 214 - -
Lele18g1310 763 Pfam Domain of unknown function (DUF4378) 596 759 IPR025486 -
Lele18g1310 763 Pfam Protein of unknown function (DUF3741) 133 175 IPR022212 -
Lele18g1310 763 PANTHER PROTEIN TRM32 4 763 IPR044257 -
Lele18g1310 763 MobiDBLite consensus disorder prediction 1 54 - -
Lele18g1310 763 MobiDBLite consensus disorder prediction 243 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1310 Lele-ChrLele18 10311865 10315125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1310 587 753 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 55.233 1.14e-53 197